Gene Information

Name : CFSAN001992_20120 (CFSAN001992_20120)
Accession : YP_007473736.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Unknown
Product : phage tail sheath protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4159557 - 4160744 bp
Length : 1188 bp
Strand : -
Note : COG3497 Phage tail sheath protein FI

DNA sequence :
ATGAGTGATTTTCACCACGGCACGCAGGTCATCGAAATTAATGACGGTACGCGTGTTATTTCCACAGTAGCGACTGCGGT
CGTCGGCATGGTTTGTACAGCCAGCGATGCAGATGCCACGCTATTTCCCCTCAATGAACCGGTACTGATTACCAATGTGC
AAAGCGCCATTGCGAAAGCCGGTAAAAAAGGCACGCTGGCTGCATCACTGCAGGCCATTGCAGACCAGTCAAAACCCGTC
ACTGTTGTTGTACGTGTTGAAGATGGAACCGGCGATGACGAGGAAGCTGCGCTCGCACAGACTGTTTCCAACATTGTTGG
TGGTACGGATGAGAACGGTAAATATACCGGTATCAAAGCTCTCCTGACCGCTCAGGCCGTCACCGGCGTCAAGCCGCGTA
TTCTTGGGGTACCGGGTCTGGATACTAAAGAGGTCGCGGTCGCACTTGCATCGGCTGCGATTAAGTTACGTGCATTCGCT
TACGTCAGCGCATGGGGATGTAAGACTATTTCCGAGGCGATGGAATATCGTAAGAATTTCAGCCAGCGCGAGCTGATGGT
TATCTGGCCTGATTTCCTCGCGTGGGACACCGTCAAAAATACCACCGCAACGGCTTACGCCACTGCGCGCGCACTTGGTC
TGCGCGCCTATATCGACCAGACAGTCGGCTGGCACAAAACCCTGTCTAACGTTGGTGTACAGGGCGTTACCGGCATCAGC
GCCTCAGTGTTCTGGGATTTGCAGGCGTCCGGCACCGATGCTGACCTGCTCAACGAGGCCGGGGTGACGACGCTGGTACG
CAAGGACGGTTTCCGTTTCTGGGGTAACCGCACCTGCTCGGATGACCCGCTTTTTCTGTTTGAGAACTACACCCGCACCG
CACAGGTGCTGGCCGACACGATGGCTGAGGCGCACATGTGGGCGGTCGACAAACCCATTACCGCCACGCTCATTCGTGAC
ATTGTTGACGGCATCAATGCCAAATTCCGCGAGCTGAAATCAAACGGCTACATCGTGGAGGGTAAATGCTGGTTCGACGA
GGAATCGAACGACAAGGAAACCCTGAAAGCCGGGAAACTGTATATCGACTACGACTATACGCCGGTTCCGCCACTGGAGA
GCCTGACCCTGCGCCAGCGTATCACCGATAAATATCTGGTGAATCTGGCTGAATCGGTCAACAGCTAA

Protein sequence :
MSDFHHGTQVIEINDGTRVISTVATAVVGMVCTASDADATLFPLNEPVLITNVQSAIAKAGKKGTLAASLQAIADQSKPV
TVVVRVEDGTGDDEEAALAQTVSNIVGGTDENGKYTGIKALLTAQAVTGVKPRILGVPGLDTKEVAVALASAAIKLRAFA
YVSAWGCKTISEAMEYRKNFSQRELMVIWPDFLAWDTVKNTTATAYATARALGLRAYIDQTVGWHKTLSNVGVQGVTGIS
ASVFWDLQASGTDADLLNEAGVTTLVRKDGFRFWGNRTCSDDPLFLFENYTRTAQVLADTMAEAHMWAVDKPITATLIRD
IVDGINAKFRELKSNGYIVEGKCWFDEESNDKETLKAGKLYIDYDYTPVPPLESLTLRQRITDKYLVNLAESVNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13484.1 putative tail sheath protein Not tested PAGI-6 Protein 2e-117 68
STY4607 NP_458690.1 probable major tail sheath protein Not tested SPI-7 Protein 2e-120 67
t4301 NP_807898.1 major tail sheath protein Not tested SPI-7 Protein 2e-120 67