|
Name : CFSAN001992_19845 (CFSAN001992_19845) Accession : YP_007473681.1 Strain : Salmonella enterica CFSAN001992 Genome accession: NC_020307 Putative virulence/resistance : Unknown Product : major capsid-like protein Function : - COG functional category : - COG ID : - EC number : - Position : 4105688 - 4106770 bp Length : 1083 bp Strand : + Note : - DNA sequence : ATGAAGAAGAATACCCGCTTTGCTTTTAACGCTTACCTGCAGCAGCTGGCGCGTCTGAACGGTGTGGCAGTTGAAGAACT GTCCAGCAAATTCACTGTGGAGCCGTCTGTGCAGCAGACGCTGGAAGACCAGATCCAGCAGTCCGCCGCTTTCCTGACGC TGATTAACGTCACGCCAGTGACTGAGCAGTCCGGTCAGCTGCTGGGGCTGGGTGTTGGCAGCACCATTGCCGGAACCACC GATACCACCACCAAAGAGCGCGAGCCTACCGATCCGACGCTGATGGAAGACGTGGAATATAAATGCGAACAGACCAACTT TGATACGGTGCTGACCTACGCAAAACTGGATCTGTGGGCCAAGTTCCAGGACTTCCAGGTGCGTATCCGCAACGCCATCG TCAAGCGTCAGGCGCTGGACCGCATCATGATCGGCTTTAACGGCGTGAAGCGCGCCAAAACCTCAAATCGTGCTGAAAAC CCGCTGCTGCAGGACGTCAATAAAGGCTGGTTACAGAAAATCCGCGAAGACGCGCCGGATCATGTTATGGGCAGTAAAAC CGCAGAAGACGGCACCACTACTGCGGAGCCGGTAAAAGTAGGTCCGGGTGGTAAATATGTAAACCTTGACGCTATGGTGA TGGATGCCGTCAACGAGCTGATCGATGTGGAGTATCAGGATGATGATGAGCTGGTTGTTGTCTGTGGTCGTGAACTGCTG TCTGACAAGTATTTCCCGCTGGTCAACAAAGAGCAGGACAACAGCGAAAAAATTGCCGCCGATATGATCATCAGCCAGAA ACGTATGGGCGGCCTGCAGGCTGTGCGTGCGCCTTTCTTCCCGGCAAATGCATTGTTAATCACCCGACTGGATAACCTGT CCATCTACTGGCAGGAAGACACCCGCCGCCGTTCTGTTATCGACAACCCGAAACGTGACCGGATTGAAAACTTTGAATCC GTTAACGAGGCGTATGTGGTCGAGGACTACCGCTGCGCGGCACTGGTGGAAAACATCGAAATGAGTGATTTCACTCCGCC TGCCGCACCTGTTGTAGCCGCAGAGTCAGGAAATGGAGAGTAA Protein sequence : MKKNTRFAFNAYLQQLARLNGVAVEELSSKFTVEPSVQQTLEDQIQQSAAFLTLINVTPVTEQSGQLLGLGVGSTIAGTT DTTTKEREPTDPTLMEDVEYKCEQTNFDTVLTYAKLDLWAKFQDFQVRIRNAIVKRQALDRIMIGFNGVKRAKTSNRAEN PLLQDVNKGWLQKIREDAPDHVMGSKTAEDGTTTAEPVKVGPGGKYVNLDAMVMDAVNELIDVEYQDDDELVVVCGRELL SDKYFPLVNKEQDNSEKIAADMIISQKRMGGLQAVRAPFFPANALLITRLDNLSIYWQEDTRRRSVIDNPKRDRIENFES VNEAYVVEDYRCAALVENIEMSDFTPPAAPVVAAESGNGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4625 | NP_458707.1 | putative major capsid protein | Not tested | SPI-7 | Protein | 6e-144 | 97 |
| t4319 | NP_807914.1 | major capsid protein | Not tested | SPI-7 | Protein | 6e-144 | 97 |
| unnamed | ABR13466.1 | predicted major capsid protein | Not tested | PAGI-6 | Protein | 1e-71 | 52 |
