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Name : CFSAN001992_19220 (CFSAN001992_19220) Accession : YP_007473560.1 Strain : Salmonella enterica CFSAN001992 Genome accession: NC_020307 Putative virulence/resistance : Virulence Product : Chelated iron transport system membrane protein yfeD Function : - COG functional category : - COG ID : - EC number : - Position : 3981557 - 3982417 bp Length : 861 bp Strand : - Note : COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; overlaps another CDS with the same product name DNA sequence : ATGAACTGGCTTGTTGAGCCGTTTGGCTACCAGTATATGCTCAACGCGATGTGGGTCTCCGCGATGGTGGGCGGTCTGTG CGCGTTTCTCTCCTGCTATTTGATGCTCAAAGGCTGGTCGCTCATTGGCGATGCGCTATCTCACTCTATTGTGCCTGGCG TCGCTGGCGCCTGGATGTTAGGGCTGCCCTTCTCGCTCGGCGCGTTTCTTTCCGGCGGACTGGCGGCAGGCAGTATGCTC TTTCTTAACCAACGCTCACGCCTGAAAGAAGACGCGATTATCGGGCTTATCTTCTCCTCTTTTTTTGGCGTCGGCCTTTT TATGGTGTCGCTCAATCCGATGTCGGTGAATATCCAGACGATTATTCTCGGCAACGTGCTGGCGATCGCGCCAGCGGATA TTGCGCAACTGGCGATTATCGGCGCGGTCTCGCTGACTATTCTGCTGTTAAAGTGGAAAGATTTAATGGTCGTCTTTTTC GATGCAACCCATGCGCGTTCTATCGGGCTTAATCCGGGTCGACTAAAGCTGTTGTTTTTCACTCTGTTGTCCGTCTCCAC CGTGGCGGCCCTGCAAACCGTTGGGGCGTTCCTGGTGATCTGTCTCGTCGTCACGCCGGGCGCGACGGCCTGGTTACTCA CCGACCGTTTTCCACGTCTGCTCATGATTGCCGTCGTGATTGGCAGCCTGACCAGTTTTCTGGGCGCATGGCTTAGCTAC TGGCTGGATGGCGCCACGGGTGGAATTATTGTCGTCATGCAAACCTTACTGTTCATCACAGCCTTTATTTTCGCCCCGAA ACACGGTCTGTTAGCCAACCGTCGACGCGCCCGCCTGCAGAAGGAGCCGACATGTTCTTAA Protein sequence : MNWLVEPFGYQYMLNAMWVSAMVGGLCAFLSCYLMLKGWSLIGDALSHSIVPGVAGAWMLGLPFSLGAFLSGGLAAGSML FLNQRSRLKEDAIIGLIFSSFFGVGLFMVSLNPMSVNIQTIILGNVLAIAPADIAQLAIIGAVSLTILLLKWKDLMVVFF DATHARSIGLNPGRLKLLFFTLLSVSTVAALQTVGAFLVICLVVTPGATAWLLTDRFPRLLMIAVVIGSLTSFLGAWLSY WLDGATGGIIVVMQTLLFITAFIFAPKHGLLANRRRARLQKEPTCS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sitC | NP_457257.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 2e-114 | 99 |
| sitC | NP_806466.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 2e-114 | 99 |
| sitC | YP_217783.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 1e-114 | 99 |
| sitC | NP_461784.1 | permease | Virulence | SPI-1 | Protein | 1e-114 | 99 |
| sitC | AAD41067.1 | SitC | Virulence | centisome 63 pathogenicity island | Protein | 1e-114 | 99 |
| sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 4e-39 | 42 |
| sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 3e-39 | 42 |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 7e-39 | 41 |
| sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 7e-39 | 41 |
| sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 7e-39 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CFSAN001992_19220 | YP_007473560.1 | Chelated iron transport system membrane protein yfeD | BAC0351 | Protein | 7e-115 | 99 |
| CFSAN001992_19220 | YP_007473560.1 | Chelated iron transport system membrane protein yfeD | BAC0441 | Protein | 1e-74 | 67 |
| CFSAN001992_19220 | YP_007473560.1 | Chelated iron transport system membrane protein yfeD | BAC0352 | Protein | 2e-39 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CFSAN001992_19220 | YP_007473560.1 | Chelated iron transport system membrane protein yfeD | VFG0527 | Protein | 6e-115 | 99 |
| CFSAN001992_19220 | YP_007473560.1 | Chelated iron transport system membrane protein yfeD | VFG0528 | Protein | 2e-39 | 42 |
