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Name : CFSAN001992_19215 (CFSAN001992_19215) Accession : YP_007473559.1 Strain : Salmonella enterica CFSAN001992 Genome accession: NC_020307 Putative virulence/resistance : Virulence Product : chelated iron transport system membrane protein YfeD Function : - COG functional category : - COG ID : - EC number : - Position : 3980718 - 3981566 bp Length : 849 bp Strand : - Note : COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; overlaps another CDS with the same product name DNA sequence : ATGTTCTTAACAACGTTACTGGAACCCTTTCAGTTTGATTTTATGGTGAACGCCCTTATGGTTTCGGTCATTGTGGCGAT TCCCTGCGCCTTGCTGTCCGTGTTTTTAGTGTTAAAAGGCTGGGCGTTAATGGGCGACGCAATGAGTCATGCGGTATTCC CCGGGGTCGTGCTGGCATATATTGTGGGGATCCCCCTGGCGATTGGCGCTTTCATTGGCGGATTATTTTGCGCTATCGCG ACCGGCTATCTGGACGATAACAGCCGCATCAAACGTGATACGGTGATGGGCATCGTCTTTTCCGGGATGTTTGGCGCAGG TCTGGTGCTCTATGTTTCTATTCAATCGGAAGTGCATCTGGATCACATCCTGTTTGGGGATATGCTGGGCGTATCGCTGG GGGATATCGTACAAACGTCGGTTATTGCACTGGGTATTGCGTTAATCATAGGGCTGAAATGGAAAGATCTCCTGCTACAC GCTTTTGACCCGCACCAGGCGAAAGCCAGCGGGCTGAATACGACGCTACTGCATTATGGCCTGCTATGTATGATTGCGCT GACTATCGTCGCCACGCTGAAATCGGTGGGCATTATTCTGTCGATTTCATTGCTTATCGCCCCCGGCGCAATTGCCATTT TGCTGACGCGACGCTTTGCGCGCGCGCTGGGATTAGCGGTGAGTCTCTCAGTTATTACCGCTTTTGCGGGCGTCTATCTG TCTTTTTATCTTGATAGCGCGCCAGCGCCGACCATCGTGGTATTATTTGCCATCGTGTTTATTGCGGTATTTATTTACGC AACATGGCGCGACAGGCGTAATGAAATCGTACCAGAGGCGCAAGGTTAA Protein sequence : MFLTTLLEPFQFDFMVNALMVSVIVAIPCALLSVFLVLKGWALMGDAMSHAVFPGVVLAYIVGIPLAIGAFIGGLFCAIA TGYLDDNSRIKRDTVMGIVFSGMFGAGLVLYVSIQSEVHLDHILFGDMLGVSLGDIVQTSVIALGIALIIGLKWKDLLLH AFDPHQAKASGLNTTLLHYGLLCMIALTIVATLKSVGIILSISLLIAPGAIAILLTRRFARALGLAVSLSVITAFAGVYL SFYLDSAPAPTIVVLFAIVFIAVFIYATWRDRRNEIVPEAQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 1e-102 | 99 |
| sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 1e-102 | 99 |
| sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 8e-103 | 99 |
| sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 7e-103 | 99 |
| sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 6e-103 | 99 |
| sitC | AAD41067.1 | SitC | Virulence | centisome 63 pathogenicity island | Protein | 8e-34 | 41 |
| sitC | YP_217783.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 1e-33 | 41 |
| sitC | NP_461784.1 | permease | Virulence | SPI-1 | Protein | 1e-33 | 41 |
| sitC | NP_457257.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 1e-33 | 41 |
| sitC | NP_806466.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 1e-33 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CFSAN001992_19215 | YP_007473559.1 | chelated iron transport system membrane protein YfeD | BAC0352 | Protein | 4e-103 | 99 |
| CFSAN001992_19215 | YP_007473559.1 | chelated iron transport system membrane protein YfeD | BAC0442 | Protein | 6e-55 | 54 |
| CFSAN001992_19215 | YP_007473559.1 | chelated iron transport system membrane protein YfeD | BAC0441 | Protein | 1e-33 | 43 |
| CFSAN001992_19215 | YP_007473559.1 | chelated iron transport system membrane protein YfeD | BAC0351 | Protein | 5e-34 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CFSAN001992_19215 | YP_007473559.1 | chelated iron transport system membrane protein YfeD | VFG0528 | Protein | 3e-103 | 99 |
| CFSAN001992_19215 | YP_007473559.1 | chelated iron transport system membrane protein YfeD | VFG0527 | Protein | 5e-34 | 41 |
