Gene Information

Name : CFSAN001992_19200 (CFSAN001992_19200)
Accession : YP_007473556.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Virulence
Product : transcriptional activator SprB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3978796 - 3979551 bp
Length : 756 bp
Strand : +
Note : COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

DNA sequence : 
ATGAGAAATGTAATTATATACGGTATTAACTGGACTAATTGTTATGCCCTACAGTCTATTTTTAAGCAAAAATATCCGGA
AAAGTGCGTTAAAACGTGTAACTCATTAACTGCACTTTTGCATTCCCTATCCGATATGCCGGACGCCGGGCTGATTTTAG
CTTTGAACCCGCATGAGCATGTTTATCTTTTTCATGCGTTGCTGACGCGGTTGCAGAACCGTAAAGTTTTGGTAGTGGCA
GATCGCTTGTATTATATCGATCGCTGTGTGCTGCAATATTTTGGCGTTATGGATTATGTTTTAAAAGACGAACTATCCTG
CGCTATCCGCTCGGAGCGAGAGAAGCTCCGTCTTCCGGAAGCCTGGCTGCGTTTCTGCCACAGGCCACAAAAGAAAACCG
TGGCTGCTACGTATGCTTTTAATGCCGGCGAGACGCCGGAAGAGGTATTGTTTAATATCAATCAATACGCCTGGTGGAAT
CTACCTCCCGGTGTCACGCAGGCGAAATATGCGCTGCTGATATTATTATCCTCCGGACATCCGGCAATTGAACTGGCGAA
AAAATTTGGTCTGGGAACAAAAACCGTCAGTATTTATCGTAAGAAGGTTATGTATCGTTTGGGGATGGACTCTTCACCGC
TATCGCTGTTCCGGGGACTGAAACTAGACGCGCATTTACAGCGCACTGCTTTTGCACATAACCCTGGTGTACCTGACGAT
AATTGCGCGTTACCGATTGCGGTAGGAATGAATTAA

Protein sequence : 
MRNVIIYGINWTNCYALQSIFKQKYPEKCVKTCNSLTALLHSLSDMPDAGLILALNPHEHVYLFHALLTRLQNRKVLVVA
DRLYYIDRCVLQYFGVMDYVLKDELSCAIRSEREKLRLPEAWLRFCHRPQKKTVAATYAFNAGETPEEVLFNINQYAWWN
LPPGVTQAKYALLILLSSGHPAIELAKKFGLGTKTVSIYRKKVMYRLGMDSSPLSLFRGLKLDAHLQRTAFAHNPGVPDD
NCALPIAVGMN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sprB NP_457260.1 possible AraC-family transcriptional regulator Virulence SPI-1 Protein 4e-116 99
sprB NP_806469.1 AraC family transcriptional regulator Virulence SPI-1 Protein 4e-116 99
sprB YP_217785.1 transcriptional regulator Virulence SPI-1 Protein 6e-117 99
sprB NP_461787.1 transcriptional regulator Virulence SPI-1 Protein 6e-117 99
sprB AAD37785.1 transcriptional regulator SprB Virulence SPI-1 Protein 4e-117 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001992_19200 YP_007473556.1 transcriptional activator SprB VFG0530 Protein 2e-117 99