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Name : CFSAN001992_19195 (CFSAN001992_19195) Accession : YP_007473555.1 Strain : Salmonella enterica CFSAN001992 Genome accession: NC_020307 Putative virulence/resistance : Virulence Product : transcriptional regulator SirC Function : - COG functional category : - COG ID : - EC number : - Position : 3977524 - 3978411 bp Length : 888 bp Strand : + Note : COG2207 AraC-type DNA-binding domain-containing proteins DNA sequence : ATGGTATTGCCTTCAATGAATAAATCAGTTGAGGCCATTAGCAATAATCACCTTCAACAGCCGAACAAATTTCCATTAAT AAATGGATTAGCTGACGTAAGAGACTATTATGTCGCAAACTGCTTATTGTTTAAACTTAATAAAGGCAGTTTGCGAATTG AAAACGAATTTGGGGAGTTCATCGAACGATCTGCGCCGTGTTTATTTTTATTGGAAAAAGATCAAACAATCACGCTTAGT ATGAGCGAAATAGAAGGGCATATTGATTTTTCTTCACTGGAAGTTTCCTATGACTTAATGCAAAAATTCTACAAAGTTTT TTACAGTACAAGAAACTATAATGATCGAGAGCTATCATTAAAAACGAAACCAAAGTATTTTTTTCATGCGGACTTGTTGC CAGGGATGAGTGATACTTTTGACTCTATTTTGCATGGTGTGGCATGTCCACGGGTTTGTAGTAATGTGAGTATTGATGAT CATGATTATTCATATTTCTCATTGATGTATCTTATATCGGCATTTGTACGTAAGCCCGGTGGGTTTGATTTCCTTGAGCG AGCAATAAAAATTACGACAAAAGAGAAAGTTTATAACATTATTATCAGCGATCTCACCCGCAAATGGTCACAGGCTGAGG TGGCAGGAAAGCTGTTTATGAGCGTATCAAGTCTGAAGCGAAAACTGGCCGCTGAAGAGGTGAGTTTTAGCAAAATATAC CTGGATGCTCGTATGAATCAGGCTATAAAATTATTACGTATGGGGGCTGGAAATATTTCACAAGTCGCGACGATGTGTGG CTATGATACGCCTTCTTATTTTATCGCTATTTTTAAACGGCATTTTAAGATTACACCGCTTAGCTTTATGCGTACAATGA ACCATTGA Protein sequence : MVLPSMNKSVEAISNNHLQQPNKFPLINGLADVRDYYVANCLLFKLNKGSLRIENEFGEFIERSAPCLFLLEKDQTITLS MSEIEGHIDFSSLEVSYDLMQKFYKVFYSTRNYNDRELSLKTKPKYFFHADLLPGMSDTFDSILHGVACPRVCSNVSIDD HDYSYFSLMYLISAFVRKPGGFDFLERAIKITTKEKVYNIIISDLTRKWSQAEVAGKLFMSVSSLKRKLAAEEVSFSKIY LDARMNQAIKLLRMGAGNISQVATMCGYDTPSYFIAIFKRHFKITPLSFMRTMNH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hilC | NP_461788.1 | invasion regulatory protein | Virulence | SPI-1 | Protein | 5e-138 | 100 |
| sprA | AAD37784.1 | transcriptional regulator SprA | Virulence | SPI-1 | Protein | 4e-138 | 100 |
| sprA | NP_806470.1 | AraC family transcriptional regulator | Virulence | SPI-1 | Protein | 2e-136 | 99 |
| hilC | YP_217786.1 | AraC family transcriptional regulator | Not tested | SPI-1 | Protein | 1e-137 | 99 |
| sprA | NP_457261.1 | possible AraC-family transcriptional regulator | Virulence | SPI-1 | Protein | 2e-136 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CFSAN001992_19195 | YP_007473555.1 | transcriptional regulator SirC | VFG0531 | Protein | 2e-138 | 100 |
