Gene Information

Name : CFSAN001992_19165 (CFSAN001992_19165)
Accession : YP_007473549.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Virulence
Product : type III secretion system needle complex protein PrgJ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3974462 - 3974767 bp
Length : 306 bp
Strand : +
Note : -

DNA sequence : 
ATGTCGATTGCAACTATTGTCCCTGAGAATGCCGTTATAGGGCAGGCGGTCAATATCAGGTCTATGGAAACGGACATTGT
CTCGCTGGATGACCGGCTACTCCAGGCTTTTTCTGGTTCGGCGATTGCCACGGCTGTGGATAAACAGACGATTACCAACA
GGATTGAGGACCCTAATCTGGTGACGGATCCTAAAGAGCTGGCTATTTCGCAAGAGATGATTTCAGATTATAACCTGTAT
GTTTCTATGGTCAGTACCCTTACTCGTAAAGGAGTCGGGGCTGTTGAAACGCTATTACGCTCATGA

Protein sequence : 
MSIATIVPENAVIGQAVNIRSMETDIVSLDDRLLQAFSGSAIATAVDKQTITNRIEDPNLVTDPKELAISQEMISDYNLY
VSMVSTLTRKGVGAVETLLRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prgJ YP_217791.1 cell invasion protein Virulence SPI-1 Protein 1e-40 100
prgJ NP_461793.1 needle complex minor subunit Virulence SPI-1 Protein 1e-40 100
prgJ NP_457266.1 pathogenicity 1 island effector protein Virulence SPI-1 Protein 5e-40 99
prgJ NP_806475.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 5e-40 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001992_19165 YP_007473549.1 type III secretion system needle complex protein PrgJ VFG0534 Protein 4e-41 100