Gene Information

Name : CFSAN001992_19140 (CFSAN001992_19140)
Accession : YP_007473544.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Virulence
Product : invasion protein IagB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3968502 - 3968984 bp
Length : 483 bp
Strand : -
Note : COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

DNA sequence :
ATGCATTATTTTTTTATCATCGTAATCTGGTTGCTTAGCATAAATACGGCATGGGCTGATTGCTGGCTTCAGGCTGAAAA
AATGTTCAATATTGAATCCGAACTACTTTACGCTATCGCCCAGCAGGAATCGGCGATGAAACCAGGCGCCATTGGTTATA
ACCGAGATGGTTCAACCGATCTTGGCCTGATGCAAATTAACAGCTTCCATATGAAAAGGCTGAAAAAAATGGGGATTAGT
GAAAAACAGTTGTTACAGGACCCCTGCATTTCTGTCATTGTGGGCGCATCCATTTTATCAGATATGATGAAAATCTACGG
TTATAGCTGGGAGGCCGTTGGCGCTTATAATGCCGGGACGTCACCGAAACGATCGGATATAAGGAAGCGTTATGCTAAAA
AAATTTGGGAGAATTACAGAAAATTAAAAGGGATGTCAGCAGAAGAGAAAAACAAAAGACTTTCTATCGCGGTAAACAAA
TAA

Protein sequence :
MHYFFIIVIWLLSINTAWADCWLQAEKMFNIESELLYAIAQQESAMKPGAIGYNRDGSTDLGLMQINSFHMKRLKKMGIS
EKQLLQDPCISVIVGASILSDMMKIYGYSWEAVGAYNAGTSPKRSDIRKRYAKKIWENYRKLKGMSAEEKNKRLSIAVNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iagB NP_806480.1 cell invasion protein Virulence SPI-1 Protein 2e-69 99
iagB YP_217796.1 cell invasion protein Virulence SPI-1 Protein 1e-69 99
iagB NP_461798.1 invasion protein precursor Virulence SPI-1 Protein 1e-69 99
iagB NP_457271.1 cell invasion protein Virulence SPI-1 Protein 2e-69 99
unnamed AAK26704.1 unknown Not tested LEE Protein 3e-18 45
Z5131 NP_290279.1 hypothetical protein Not tested LEE Protein 7e-18 45
unnamed AAC31524.1 L0045 Not tested LEE Protein 5e-18 45
ECs4579 NP_312606.1 hypothetical protein Not tested LEE Protein 7e-18 45
unnamed ACU09469.1 putative lytic transglycosylase Not tested LEE Protein 5e-18 45
ECO103_3629 YP_003223486.1 hypothetical protein Not tested LEE Protein 4e-18 45
ECO26_5260 YP_003232142.1 hypothetical protein Not tested LEE Protein 4e-18 45
unnamed CAI43885.1 hypothetical protein Not tested LEE Protein 3e-18 45
unnamed AAL57531.1 unknown Not tested LEE Protein 3e-18 45
st13 CAC81851.1 ST13 protein Not tested LEE II Protein 3e-18 45
ECO111_3763 YP_003236099.1 hypothetical protein Not tested LEE Protein 9e-18 44
unnamed AAC38373.1 rOrf3 Not tested LEE Protein 8e-18 44
unnamed AAL06358.1 unknown Not tested LEE Protein 7e-19 44
etgA AFO66324.1 putative lytic transglycosylase Not tested SESS LEE Protein 1e-21 41
etgA AFO66404.1 putative lytic transglycosylase Not tested SESS LEE Protein 1e-21 41
ECs3711 NP_311738.1 hypothetical protein Not tested LIM Protein 6e-16 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001992_19140 YP_007473544.1 invasion protein IagB VFG0539 Protein 3e-70 99
CFSAN001992_19140 YP_007473544.1 invasion protein IagB VFG0823 Protein 2e-18 45
CFSAN001992_19140 YP_007473544.1 invasion protein IagB VFG0994 Protein 3e-26 44
CFSAN001992_19140 YP_007473544.1 invasion protein IagB VFG0719 Protein 3e-18 44
CFSAN001992_19140 YP_007473544.1 invasion protein IagB VFG1789 Protein 1e-15 41