|
Name : CFSAN001992_19070 (CFSAN001992_19070) Accession : YP_007473530.1 Strain : Salmonella enterica CFSAN001992 Genome accession: NC_020307 Putative virulence/resistance : Virulence Product : type III secretion system protein SpaO Function : - COG functional category : - COG ID : - EC number : - Position : 3955282 - 3956193 bp Length : 912 bp Strand : + Note : COG1886 Flagellar motor switch/type III secretory pathway protein DNA sequence : ATGTCATTGCGTGTGAGACAGATTGATCGTCGCGAATGGCTATTGGCGCAAACCGCGACAGAATGCCAGCGCCATGGCCA GGAAGCTACGCTGGAATATCCGACGCGACAGGGAATGTGGGTTCGGTTGAGCGATGCAGAAAAACGGTGGTCGGCGTGGA TTCAACCTGGGGACTGGCTTGAGCATGTCTCTCCCGCTCTGGCGGGGGCGGCGGTTTCTGCTGGCGCTGAGCACCTGGTG GTTCCCTGGCTTGCTGCGACAGAGCGACCGTTTGAGTTGCCCGTGCCGCATTTGTCCTGTCGGCGTTTATGCGTAGAGAA CCCCGTGCCGGGAAGCGCGCTGCCGGAAGGGAAATTGTTGCACATTATGAGCGATCGGGGCGGCCTGTGGTTTGAATATC TTCCTGAACTGCCTGCAGTCGGGGGCGGCAGGCCGAAAATGCTGCGTTGGCCGTTGCGCTTTGTAATCGGTAGCAGTGAT ACGCAGCGTTCGTTGCTGGGCCGAATCGGGATCGGAGATGTACTCCTGATTCGTACTTCCCGTGCGGAAGTTTATTGCTA CGCGAAAAAGTTAGGTCATTTCAACCGTGTTGAAGGGGGAATTATTGTGGAAACGTTAGATATTCAACATATCGAAGAAG AAAATAATACAACTGAAACTGCAGAAACTCTGCCTGGCTTGAACCAATTGCCCGTCAAACTGGAATTTGTTTTGTATCGT AAGAACGTTACCCTCGCCGAACTCGAAACCATGGGGCAGCAGCAGCTATTATCACTGCCGACCAATGCTGAACTTAACGT TGAAATTATGGCGAATGGTGTTTTGCTGGGTAATGGCGAACTGGTACAGATGAATGACACCTTAGGCGTTGAGATCCATG AATGGCTGAGCGAGTCTGGTAATGGGGAATGA Protein sequence : MSLRVRQIDRREWLLAQTATECQRHGQEATLEYPTRQGMWVRLSDAEKRWSAWIQPGDWLEHVSPALAGAAVSAGAEHLV VPWLAATERPFELPVPHLSCRRLCVENPVPGSALPEGKLLHIMSDRGGLWFEYLPELPAVGGGRPKMLRWPLRFVIGSSD TQRSLLGRIGIGDVLLIRTSRAEVYCYAKKLGHFNRVEGGIIVETLDIQHIEEENNTTETAETLPGLNQLPVKLEFVLYR KNVTLAELETMGQQQLLSLPTNAELNVEIMANGVLLGNGELVQMNDTLGVEIHEWLSESGNGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| spaO | NP_457285.1 | surface presentation of antigens protein (associated with type III secretion and virulence) | Virulence | SPI-1 | Protein | 1e-125 | 99 |
| spaO | NP_806494.1 | surface presentation of antigens protein SpaO | Virulence | SPI-1 | Protein | 1e-125 | 99 |
| spaO | YP_217810.1 | surface presentation of antigens protein SpaO | Virulence | SPI-1 | Protein | 7e-126 | 99 |
| spaO | NP_461812.1 | surface presentation of antigens protein SpaO | Virulence | SPI-1 | Protein | 3e-126 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CFSAN001992_19070 | YP_007473530.1 | type III secretion system protein SpaO | VFG0552 | Protein | 1e-126 | 99 |
