Gene Information

Name : CFSAN001992_19050 (CFSAN001992_19050)
Accession : YP_007473526.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Virulence
Product : type III secretion system chaperone SpaK
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3952152 - 3952559 bp
Length : 408 bp
Strand : +
Note : -

DNA sequence :
ATGCAACATTTGGATATCGCTGAATTAGTTCGTTCCGCACTGGAAGTAAGTGGTTGCGATCCTTCACTCATCGGAGGAAT
AGATAGCCATTCAACAATTGTTCTGGATTTATTTGCATTGCCAAGTATCTGTATCAGCGTCAAGGACGATGATGTATGGA
TCTGGGCGCAATTGGGTGCTGACAGCATGGTGGTATTACAACAGCGGGCTTATGAAATCGTAATGACCATAATGGAAGGA
TGCCAGTTTGTCCGCGGCGGGCAATTACTACTGGGGGAACAGAATGGGGAGCTAACGCTTAAAGCCTTAGTGCATCCGGA
TTTTTTATCTGACGGTGAAAAGTTCTCTAATGCCTTGAATGGGTTTTACAACTATCTGGAAGTTTTTAGTCGGTCGCTAA
TGAGATGA

Protein sequence :
MQHLDIAELVRSALEVSGCDPSLIGGIDSHSTIVLDLFALPSICISVKDDDVWIWAQLGADSMVVLQQRAYEIVMTIMEG
CQFVRGGQLLLGEQNGELTLKALVHPDFLSDGEKFSNALNGFYNYLEVFSRSLMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spak NP_457289.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 2e-50 98
spak NP_806498.1 virulence-associated secretory protein Virulence SPI-1 Protein 2e-50 98
invB NP_461816.1 secretion chaperone Virulence SPI-1 Protein 2e-50 98
invB YP_217814.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 2e-50 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001992_19050 YP_007473526.1 type III secretion system chaperone SpaK VFG0556 Protein 4e-51 98