Gene Information

Name : CFSAN001992_19035 (CFSAN001992_19035)
Accession : YP_007473523.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Virulence
Product : type III secretion system outer membrane pore InvG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3947243 - 3948931 bp
Length : 1689 bp
Strand : +
Note : COG1450 Type II secretory pathway, component PulD

DNA sequence :
ATGAAGACACATATTCTTTTGGCCAGAGTGCTGGCATGTGCCGCGCTTGTTCTGGTTGCACCTGGTTATTCTAGTGAAAA
AATACCTGTAACGGGAAGTGGGTTTGTTGCGAAAGACGATAGCCTGCGGACATTTTTCGATGCAATGGCGCTACAGCTAA
AGGAGCCTGTCATTGTTAGCAAAATGGCGGCACGAAAAAAAATTACGGGCAACTTTGAGTTTCACGATCCTAACGCATTA
CTGGAGAAGCTTTCCCTACAACTGGGGCTGATTTGGTATTTCGATGGGCAGGCTATCTATATTTATGACGCCAGTGAAAT
GCGCAATGCCGTGGTTTCTTTACGCAACGTCTCACTCAATGAGTTCAACAATTTTCTAAAACGCTCAGGTTTATATAACA
AAAATTACCCGCTACGTGGCGATAACCGTAAAGGAACATTCTATGTTTCAGGGCCACCCGTCTATGTTGATATGGTGGTC
AACGCCGCCACCATGATGGACAAGCAAAACGATGGTATTGAGCTGGGACGCCAGAAAATAGGGGTGATGCGTCTGAACAA
TACCTTCGTGGGCGATCGTACCTACAATCTGCGCGATCAGAAAATGGTTATCCCCGGTATTGCTACGGCGATTGAAAGGT
TATTGCAGGGAGAAGAGCAACCCTTAGGTAATATTGTCAGTAGCGAACCTCCGGCGATGCCAGCGTTTTCAGCGAATGGA
GAAAAAGGTAAAGCAGCAAATTATGCCGGTGGCATGAGTCTGCAGGAAGCTTTAAAGCAAAATGCCGCGGCGGGCAATAT
TAAAATCGTGGCCTATCCGGATACCAACAGTTTGTTAGTAAAAGGAACGGCTGAGCAGGTGCATTTTATCGAAATGCTGG
TTAAAGCGCTGGATGTCGCCAAACGTCACGTAGAATTATCCCTGTGGATTGTCGATCTTAATAAAAGCGATCTGGAGCGT
TTGGGCACTTCATGGAGCGGCAGCATTACTATTGGGGACAAACTTGGCGTGTCATTAAACCAGGCTTCAATAAGTACCCT
CGATGGCAGTCGATTCATCGCCGCGGTAAATGCGTTAGAAGAGAAGAAACAGGCGACGGTGGTTTCGCGCCCGGTATTAC
TGACTCAGGAAAATGTTCCCGCTATTTTTGATAACAACAGAACGTTTTACACCAAGCTGATTGGGGAACGTAATGTGGCG
CTTGAGCATGTAACATACGGAACAATGATCCGAGTGCTGCCCCGTTTTTCCGCAGATGGTCAGATAGAAATGTCGCTGGA
CATTGAAGATGGTAACGATAAGACGCCGCAATCCGATACTACCACCTCCGTAGATGCGTTACCCGAAGTCGGACGAACGT
TAATTAGCACTATTGCGAGAGTTCCGCACGGAAAAAGTTTGCTGGTCGGTGGTTATACACGGGATGCAAATACCGATACT
GTCCAAAGTATTCCGTTTTTAGGCAAATTACCGCTTATTGGTAGCCTGTTCCGTTATTCCAGTAAGAATAAAAGTAATGT
TGTTCGTGTATTCATGATTGAACCAAAAGAAATTGTCGACCCGTTAACGCCGGATGCCAGCGAATCGGTAAACAATATTC
TGAAACAAAGCGGTGCCTGGAGTGGGGACGATAAGTTACAGAAATGGGTTCGTGTTTATCTGGATAGAGGTCAGGAGGCA
ATTAAATGA

Protein sequence :
MKTHILLARVLACAALVLVAPGYSSEKIPVTGSGFVAKDDSLRTFFDAMALQLKEPVIVSKMAARKKITGNFEFHDPNAL
LEKLSLQLGLIWYFDGQAIYIYDASEMRNAVVSLRNVSLNEFNNFLKRSGLYNKNYPLRGDNRKGTFYVSGPPVYVDMVV
NAATMMDKQNDGIELGRQKIGVMRLNNTFVGDRTYNLRDQKMVIPGIATAIERLLQGEEQPLGNIVSSEPPAMPAFSANG
EKGKAANYAGGMSLQEALKQNAAAGNIKIVAYPDTNSLLVKGTAEQVHFIEMLVKALDVAKRHVELSLWIVDLNKSDLER
LGTSWSGSITIGDKLGVSLNQASISTLDGSRFIAAVNALEEKKQATVVSRPVLLTQENVPAIFDNNRTFYTKLIGERNVA
LEHVTYGTMIRVLPRFSADGQIEMSLDIEDGNDKTPQSDTTTSVDALPEVGRTLISTIARVPHGKSLLVGGYTRDANTDT
VQSIPFLGKLPLIGSLFRYSSKNKSNVVRVFMIEPKEIVDPLTPDASESVNNILKQSGAWSGDDKLQKWVRVYLDRGQEA
IK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
invG NP_457292.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 0.0 99
invG NP_806501.1 virulence-associated secretory protein Virulence SPI-1 Protein 0.0 99
invG YP_217817.1 invasion protein; outer membrane Virulence SPI-1 Protein 0.0 99
invG NP_461819.1 outer membrane secretin precursor Virulence SPI-1 Protein 0.0 99
ECs3733 NP_311760.1 EivG Not tested LIM Protein 2e-145 55
invG AAS66859.1 InvG Not tested SSR-2 Protein 4e-132 50
ysaC AAS66838.1 YsaC Not tested SSR-1 Protein 1e-92 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001992_19035 YP_007473523.1 type III secretion system outer membrane pore InvG VFG0559 Protein 0.0 99
CFSAN001992_19035 YP_007473523.1 type III secretion system outer membrane pore InvG VFG1004 Protein 9e-126 51
CFSAN001992_19035 YP_007473523.1 type III secretion system outer membrane pore InvG VFG2463 Protein 3e-103 43