Gene Information

Name : CFSAN001992_14850 (CFSAN001992_14850)
Accession : YP_007472698.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3062832 - 3063596 bp
Length : 765 bp
Strand : +
Note : COG3710 DNA-binding winged-HTH domains

DNA sequence :
ATGTTATGGATAATTAACGATAATATTGAATTTAATCCAGAAATGAATCGCCTGGCGTCATTATCGAGGCCAGATCTCAA
CATTATTCTGACAACGCCCGCCAGCCGCTGCTTGCGCCTTCTGCTGGAAAACGCCCCCTCCGTCGTCTCACAACAAACAT
TCTTTCAAAAAGTGTGGGAAGAAGACGGCATGGTGGTGTCGGCAAATACGCTTTATCAGAATATCTCCATTATTCGCCGC
GGATTACGTACCGTTGGCGAAAATGAAGATACGCTGATAATCACGGTTCCGCGTAGAGGCTTTCAGATTGAGCCTGGTGT
GAGCATCATGACCATCCGCAAAGACTTCGCTCAGACAATAGAAAAAAAGGGTGAGACGCCGCCGCGTATGTCAGAGCGTT
GGTTTAAACATTATGTACCTGTACTTTGGATGACCGGGACATTTGCTGTCGGTATTTTGCTTGGCACTATAAGCTGGCAA
ACCGTTCCTGATAAGGATTTTTATGATCGCTACACGCTGGTTGAAACAACCCAGGGTTGTCATTTTTTCTCGCGGAATGA
AGATATCGAAAGCGGTAGCCGCTTTGCAAGCTATAAGTCAATGATTCTAAAAACCGGTATGGATTGTCAGAAATACCCAT
GGGTCTATTTCCCTTCCAGCAGTCGCACCCCAGCGGTTACGGCATTGATTTGTCAGCAACCTTATAAAACGCTCGGTGAT
ACAGGCTGCGTGACGCTTTTTTTCCGCGGGGTGGCACATGGGTAA

Protein sequence :
MLWIINDNIEFNPEMNRLASLSRPDLNIILTTPASRCLRLLLENAPSVVSQQTFFQKVWEEDGMVVSANTLYQNISIIRR
GLRTVGENEDTLIITVPRRGFQIEPGVSIMTIRKDFAQTIEKKGETPPRMSERWFKHYVPVLWMTGTFAVGILLGTISWQ
TVPDKDFYDRYTLVETTQGCHFFSRNEDIESGSRFASYKSMILKTGMDCQKYPWVYFPSSSRTPAVTALICQQPYKTLGD
TGCVTLFFRGVAHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
marT NP_462658.3 transcriptional regulator Not tested SPI-3 Protein 4e-117 99
marT YP_218667.1 transcriptional regulatory protein Not tested SPI-3 Protein 1e-116 99
marT AAD16956.1 putative transcriptional regulator MarT Virulence SPI-3 Protein 2e-116 99
ECs3704 NP_311731.1 sensory transducer Not tested LIM Protein 9e-54 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001992_14850 YP_007472698.1 transcriptional regulator VFG0570 Protein 2e-117 99