Gene Information

Name : CFSAN001992_12650 (CFSAN001992_12650)
Accession : YP_007472268.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2573469 - 2574884 bp
Length : 1416 bp
Strand : -
Note : COG0305 Replicative DNA helicase

DNA sequence :
ATGGCAGGAAATAAACCCTTCAACAAACCACAGACTGATGCCCGCGACCGCGATCCGCAGGTTGCCGGGATAAAAGTACC
GCCGCACTCGATTGAAGCGGAACAGTCGGTGTTGGGCGGTTTAATGCTGGATAACGAGCGCTGGGACGATGTGGCCGAGC
GCGTGGTGGCGGAAGATTTCTATACCCGCCCGCATCGCCATATCTTTACGGAGATGGGGCGCTTGCAGGAAAGCGGCAGT
CCTATCGACCTGATTACGCTCGCGGAATCGCTGGAGCGGCAGGGCCAACTGGACAGCGTCGGCGGTTTCGCCTATCTGGC
GGAGTTGTCTAAAAACACGCCAAGCGCGGCGAATATCAGTGCTTATGCGGACATTGTGCGCGAACGCGCCGTGGTCCGCG
ATATGATCGCGGTGGCGCATGAAATTGCGGACGCTGGTTACGATCCACAGGGGCGTAATAGCGACGAACTGCTGGATCTG
GCGGAGTCGCGCGTCTTCCAGATCGCGGAAAACCGGGCCAACAAAGACGAAGGCCCGAAAAGCATCGACCAGATTCTCGA
CGCTACCGTGGCGCGTATTGAGCAGTTGTTCCAGCAACCGCACGATGGCGTTACAGGCGTGGATACCGGCTATCAGGATC
TCAATAAAAAGACGGCAGGGTTACAGCGTTCGGATTTGATTATCGTCGCGGCGCGTCCCTCCATGGGTAAAACCACTTTT
GCGATGAACCTCTGCGAAAATGCGGCGATGTTGCAGGATAAACCGGTACTGATCTTCAGTCTGGAGATGCCCGGCGAACA
GATCATGATGCGTATGCTGGCCTCGCTGTCCCGCGTCGATCAGACACGTATTCGTACCGGTCAACTCGATGATGAAGACT
GGGCGCGAATCTCCGGCACGATGGGCATTCTGCTGGAGAAACGCAATATGTATATTGACGACTCCTCAGGTCTTACGCCG
ACAGAAGTCCGTTCGCGCGCGCGGCGTATTTTCCGCGAACATGGCGGGTTAAGTCTGATTATGATCGACTACCTGCAATT
GATGCGTGTGCCGTCGCTTTCTGATAACCGTACTCTGGAAATCGCCGAAATTTCCCGCTCGTTGAAAGCGCTGGCGAAGG
AACTCCAGGTGCCAGTCGTGGCGCTATCGCAGCTTAACCGCTCCCTGGAACAACGCGCGGATAAACGTCCGGTGAACTCC
GACCTGCGTGAATCCGGCTCTATTGAACAGGATGCCGACTTAATTATGTTTATCTACCGTGATGAGGTTTATCACGAGAA
CAGCGACTTAAAAGGCATTGCTGAAATTATTATTGGTAAGCAACGTAACGGTCCTATCGGTACGGTTCGTCTGACGTTCA
ATGGTCAGTGGTCGCGCTTCGATAACTATGCGGGACCGCAATACGATGATGAGTAA

Protein sequence :
MAGNKPFNKPQTDARDRDPQVAGIKVPPHSIEAEQSVLGGLMLDNERWDDVAERVVAEDFYTRPHRHIFTEMGRLQESGS
PIDLITLAESLERQGQLDSVGGFAYLAELSKNTPSAANISAYADIVRERAVVRDMIAVAHEIADAGYDPQGRNSDELLDL
AESRVFQIAENRANKDEGPKSIDQILDATVARIEQLFQQPHDGVTGVDTGYQDLNKKTAGLQRSDLIIVAARPSMGKTTF
AMNLCENAAMLQDKPVLIFSLEMPGEQIMMRMLASLSRVDQTRIRTGQLDDEDWARISGTMGILLEKRNMYIDDSSGLTP
TEVRSRARRIFREHGGLSLIMIDYLQLMRVPSLSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRSLEQRADKRPVNS
DLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGKQRNGPIGTVRLTFNGQWSRFDNYAGPQYDDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 1e-103 55
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 5e-105 54
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 1e-105 54
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 2e-104 54
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 3e-100 50
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 2e-91 50
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 2e-91 50
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 1e-85 49
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 5e-80 45