Gene Information

Name : CFSAN001992_11480 (CFSAN001992_11480)
Accession : YP_007472036.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Virulence
Product : toxin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2315539 - 2315880 bp
Length : 342 bp
Strand : -
Note : -

DNA sequence :
ATGAAAACTCTACCTGCAACAACTCCGCAGGCGGCGACGCTATGTCTGTCGCCCGTGGCTGTCTGGCAAATGCTGCTTGC
ACGCCTGCTGGAACAACATTATGGACTGACACTTAACGACACACCATTCAGTGATGAAACGGTAATTCAGGAACATATCG
ATGCCGGTATATCTTTGGCCGATGCCGTGAATTATCTGGTGGAAAAGTACGAACTGGTTCGTATTGATCGCAGGGGATTC
GACTGGCAAGAACAGTCCCCATATCTGCGGGCAGTCGATATTCTGCGGGCGCGGCAGGCAACTGGTTTATTGAAAAGAAA
TCGTATTAGCGCGGCACAGTGA

Protein sequence :
MKTLPATTPQAATLCLSPVAVWQMLLARLLEQHYGLTLNDTPFSDETVIQEHIDAGISLADAVNYLVEKYELVRIDRRGF
DWQEQSPYLRAVDILRARQATGLLKRNRISAAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66207.1 hypothetical protein Not tested PAI III 536 Protein 3e-28 67
yeeV YP_854325.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-28 67
unnamed AAL08478.1 unknown Not tested SRL Protein 7e-27 66
unnamed CAD42101.1 hypothetical protein Not tested PAI II 536 Protein 1e-27 66
yeeV CAE85204.1 YeeV protein Not tested PAI V 536 Protein 1e-27 66
ECO103_3592 YP_003223449.1 hypothetical protein Not tested LEE Protein 5e-28 65
z5091 CAD33789.1 Z5091 protein Not tested PAI I 536 Protein 2e-26 65
Z5091 NP_290242.1 hypothetical protein Not tested LEE Protein 5e-27 65
ECs4539 NP_312566.1 hypothetical protein Not tested LEE Protein 5e-27 65
unnamed AAC31486.1 L0007 Not tested LEE Protein 3e-27 65
unnamed ACU09433.1 conserved hypothetical protein Not tested LEE Protein 3e-27 65
unnamed AAK00482.1 unknown Not tested SHI-1 Protein 4e-28 65
unnamed AAL67342.1 intergenic-region protein Not tested PAI II CFT073 Protein 5e-27 65
yeeV NP_838487.1 hypothetical protein Not tested SHI-1 Protein 5e-28 65
yeeV NP_708773.1 hypothetical protein Not tested SHI-1 Protein 5e-28 65
aec76 AAW51759.1 Aec76 Not tested AGI-3 Protein 2e-27 64
unnamed CAI43848.1 hypothetical protein Not tested LEE Protein 2e-27 64
yeeV ADD91699.1 YeeV Not tested PAI-I AL862 Protein 1e-26 63
c5149 NP_756997.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-26 63
unnamed AAL67389.1 L0007-like protein Not tested PAI II CFT073 Protein 7e-27 63
unnamed AAL57575.1 unknown Not tested LEE Protein 4e-28 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001992_11480 YP_007472036.1 toxin VFG1682 Protein 1e-28 67
CFSAN001992_11480 YP_007472036.1 toxin VFG1069 Protein 3e-27 66
CFSAN001992_11480 YP_007472036.1 toxin VFG1620 Protein 4e-28 66
CFSAN001992_11480 YP_007472036.1 toxin VFG1530 Protein 8e-27 65
CFSAN001992_11480 YP_007472036.1 toxin VFG0786 Protein 1e-27 65
CFSAN001992_11480 YP_007472036.1 toxin VFG0663 Protein 1e-28 65