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Name : CFSAN001992_10920 (CFSAN001992_10920) Accession : YP_007471924.1 Strain : Salmonella enterica CFSAN001992 Genome accession: NC_020307 Putative virulence/resistance : Virulence Product : outer membrane usher protein Function : - COG functional category : - COG ID : - EC number : - Position : 2194993 - 2197614 bp Length : 2622 bp Strand : - Note : COG3188 P pilus assembly protein, porin PapC DNA sequence : ATGCGTAATCAGCTTTTCATGACGCGATATTACTCCAGCGTAGCTAAACCCGTATTAACCCCGCTGGCGTTGGCTATCGC ACTGGCGCCTGCGCCGGGGTGGGCGGAAAACTATTTCAACCCGGCATTTCTGTCTGACGACCCGTCTGCGGTGGCCGACT TATCGACCTTTTCCCGTAATGCCCAGGCGGCGGGAATGTATCGCGTTGACGTTTACCTGAACAATACGTTTCTCGCGACC AGAGACATTGCCTTCCAGGCGGTGAAAACGACGGGAAAAAGCGCGCCCACCGATGACAGCGGATTACGCGCCTGCCTGAC GCCTGAAATGCTTAAAAATATGGGGGTAAACACCGGGGCGTTTCCACTGTTGGCGAAGGCGGCGGCGGGAAGTTGCCCGG ATCTCGCCAGTGCGATACCGGCCGCCCGGACCCGCTTTGATTTTGCGCAGCAACGTCTCGACATTAGCATCCCGCAGGCG GCGATGGTTGCCAGCGCCAGAGGCTATATCCCACCGCAATACTGGGATGAAGGTATTAACGCGTTGTTATTGAATTACAC CTTTACCGGCGCGAATAGTCAGGATCGGAGCCCAGGCGGCAGTGCGGAGAACAGCTATTTTCTTGGATTGAATAGCGGCC TTAATCTGGGGGCCTGGCGGTTACGCGACTACTCCACATGGAACGCGAATAGCGGCGATCAGAATAGCGACAGCGACTGG CAGCACATCAGTACTTATCTGGAACGTGATGTGGTCTTTTTGCAGGGAGAACTGACGGCAGGCGATAGTTATACCCCCTC CGCATTATTCGACAGCATTCCTTTTCGCGGGCTACAACTGGCGTCTGACGACAATATGTTGCCAGACAGCATGAAAGGCT TCGCGCCGACCATTCACGGCATTGCCAGAAGCAACGCGCAAGTGACCATTCGGCAAAACGGCTACATCATCAATCAGCGC TATGTGCCGCCCGGGGCATTTACTATTAATGATCTCTATCCCACCGCCGCCAGCGGCGATTTGACTGTGGAAGTCAAAGA GTCTGACGGTTCTATTAATCGCTATAACGTGCCCTATTCCGCCGTGCCGATTCTACAACGAGAAGGGCGGCTGAAGTATG CGGCGACGGTGGCGGAGTATCGCAGCGATAGTAGTCAAAAAGAGAAGGTGAAATTCAGTCAGGCGACCTTGATATGGGGG TTACCGCATGGTTTTACGCTGTATGGCGGAACACAACTTTCCAGTCATTATCACGCGCTGGCGATCGGCAGCGGCGCAAA TCTGGGCGACTGGGGCGCGGTGTCGCTGGATGTCACCCAGGCTACCAGTACGCTGGCGGATAATAACACCTACCAGGGGC AATCGCTGCGTTTCCTGTATGCCAAATCGCTTGCACAGTCAGGAACCAATTTACAGCTTATGGGCTATCGCTATTCAACC TCGGGCTTTTATACGCTGGATGATACCACGTGGAAACGGATGAGCGGCTATGACGATGACAGTCGGACTGACAGCGATAA AAGCAGGCCGGAATGGGCGGATTATTACAATCTTTATTATACCAGAAGGGGGAAAGTACAACTCGATATCAATCAACAGC TAGGCGGGTTGGGATCGCTTTTTATTACCGGCAGTCAACAAAGTTACTGGCACACTGATGAAAAGGATTCTTTGTTGCAG GTGGGATACAGCGATACGCTGGCGGGTATTGCATGGAGTGTTTCTTATAACAATAACAAATCCGCAGGCGATGCGGAGCG CGATCAAATTTTCGCGCTGAATATCTCGGTGCCGCTAAGTCAATGGCTGCAACACGATGATGAGGTTACGCGCCATCACA ATGTTTACGCTACCTTTAGCACCAGTACGGACAAACAGCATAACGTTACGCAGAATGCGGGCCTTAGCGGCACACTGCTG GACGAAAACAATCTTAGTTACAACATACAGCAAGGTTATCAAAATCACGGTATTGGCGAAAGCGGCTCCGCCAGCCTGGA ATACGATGGGGCGAAAGGCAACGCCAACATTGGCTATAACGTTAGCGATAACGGCGATTACCAGCAGGTGAATTATGGCC TGAGCGGCGGCCTGGTGGCGCACGTGCATGGAGTGACGCTAAGCCAGCCGCTGGGCAATACCAATATTTTGATTGCCGCG CCGGGCGCAGCCAACGTCGGCGTTGTCGACCAGCCGGGTATTCATACGGACGCGCGTGGCTATGCGGTGGTGCCGTATGC GACAACATATCGCCAAAACCGTATGGCGCTGGACGTTAACGCGATGGCTGATGATGTCGATATTGATGACGCGGTGACTC GCGTTGTGCCGACCGAAGGCGCGCTGGTTCTAGCCCGCTTTAAAGCGCGAGTCGGCGCGCGTGCCCTGGTAACGCTGAAT CATAACGGTAAGCCTGTACCCTTTGGCGCAACGGTGACGGTGAATGATCGTCATGCGGAGGCGATTGTTGACGAGGCCGG GGAAGTCTATCTTTCCGGGTTGTCAGCGCAAGGCATTCTGCACGTTCGCTGGGGGAACCTGCCGGATCAACAGTGTGTCG CGTCCTATCATCTCTCTTCCTCCCGTCAGATTCTGAGTCGACAACATGCGGAGTGTCATTAA Protein sequence : MRNQLFMTRYYSSVAKPVLTPLALAIALAPAPGWAENYFNPAFLSDDPSAVADLSTFSRNAQAAGMYRVDVYLNNTFLAT RDIAFQAVKTTGKSAPTDDSGLRACLTPEMLKNMGVNTGAFPLLAKAAAGSCPDLASAIPAARTRFDFAQQRLDISIPQA AMVASARGYIPPQYWDEGINALLLNYTFTGANSQDRSPGGSAENSYFLGLNSGLNLGAWRLRDYSTWNANSGDQNSDSDW QHISTYLERDVVFLQGELTAGDSYTPSALFDSIPFRGLQLASDDNMLPDSMKGFAPTIHGIARSNAQVTIRQNGYIINQR YVPPGAFTINDLYPTAASGDLTVEVKESDGSINRYNVPYSAVPILQREGRLKYAATVAEYRSDSSQKEKVKFSQATLIWG LPHGFTLYGGTQLSSHYHALAIGSGANLGDWGAVSLDVTQATSTLADNNTYQGQSLRFLYAKSLAQSGTNLQLMGYRYST SGFYTLDDTTWKRMSGYDDDSRTDSDKSRPEWADYYNLYYTRRGKVQLDINQQLGGLGSLFITGSQQSYWHTDEKDSLLQ VGYSDTLAGIAWSVSYNNNKSAGDAERDQIFALNISVPLSQWLQHDDEVTRHHNVYATFSTSTDKQHNVTQNAGLSGTLL DENNLSYNIQQGYQNHGIGESGSASLEYDGAKGNANIGYNVSDNGDYQQVNYGLSGGLVAHVHGVTLSQPLGNTNILIAA PGAANVGVVDQPGIHTDARGYAVVPYATTYRQNRMALDVNAMADDVDIDDAVTRVVPTEGALVLARFKARVGARALVTLN HNGKPVPFGATVTVNDRHAEAIVDEAGEVYLSGLSAQGILHVRWGNLPDQQCVASYHLSSSRQILSRQHAECH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 0.0 | 51 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 0.0 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CFSAN001992_10920 | YP_007471924.1 | outer membrane usher protein | VFG0876 | Protein | 0.0 | 52 |
| CFSAN001992_10920 | YP_007471924.1 | outer membrane usher protein | VFG1645 | Protein | 0.0 | 50 |
| CFSAN001992_10920 | YP_007471924.1 | outer membrane usher protein | VFG0912 | Protein | 0.0 | 50 |
| CFSAN001992_10920 | YP_007471924.1 | outer membrane usher protein | VFG0446 | Protein | 7e-179 | 49 |
| CFSAN001992_10920 | YP_007471924.1 | outer membrane usher protein | VFG0454 | Protein | 4e-163 | 43 |
