Gene Information

Name : CFSAN001992_10115 (CFSAN001992_10115)
Accession : YP_007471765.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Virulence
Product : fimbrial chaperone protein StiB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2019779 - 2020462 bp
Length : 684 bp
Strand : +
Note : COG3121 P pilus assembly protein, chaperone PapD

DNA sequence : 
ATGAATTCATTGGCTAAAGCAGGGTTGCTTTGTTGCCTGTTGTGCGGTTCGCTGGCGCATGCCGCAGGGATAAACATCGG
CGCAACGCGGGTTATTTTTCACGGCGATGCCAAAGATGCATCCATATCGATAAGCAATAGCGACAACGTTCCCTATTTAA
TTCAGTCCTGGGCGCAATCGATCAGCGAAACCGGGGCGAGCGGCGATGCGCCGTTTATGGTCACCCCGCCGCTTTTTCGC
CTTAATGGCGGGCAAAAGAACGTACTGCGAATTATCCGTACCGGCGGCAATTTGCCGGAAGATCGCGAGTCGCTGTACTG
GCTGGATATTAAATCGATTCCCAGCAGCAATCCGGACAATAAGCACAATACGCTCATGCTGGCCGTTAAAGCGGAATTTA
AGCTGATTTACCGGCCAAAAGCGTTAACCCAAAAGCCAGAAGAGGTTGCCGATCGGTTAACGTGGTCGCGTCAGGGTCGC
ACGCTCACCGTGAAGAACCCCACGCCCTATTATATGAACTTCGCCACCCTTTCCGTTGGCAGTCAAAAAGTAAAAGCCCC
GCGCTATGTGGCGCCTTTCGGCAACGCGCAGTACACGCTGCCTGCCGCCGCCAGCGGCCCGATCGCCTGGTCTATCATCA
ACGATTTTGGCGGTACTGGCCCCGAACATAAACAAACGCCTTGA

Protein sequence : 
MNSLAKAGLLCCLLCGSLAHAAGINIGATRVIFHGDAKDASISISNSDNVPYLIQSWAQSISETGASGDAPFMVTPPLFR
LNGGQKNVLRIIRTGGNLPEDRESLYWLDIKSIPSSNPDNKHNTLMLAVKAEFKLIYRPKALTQKPEEVADRLTWSRQGR
TLTVKNPTPYYMNFATLSVGSQKVKAPRYVAPFGNAQYTLPAAASGPIAWSIINDFGGTGPEHKQTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
safB NP_454906.1 periplasmic fimbrial chaperone protein Not tested SPI-6 Protein 2e-41 43
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 3e-37 41
afaB AAK16197.1 AfaB Virulence PAI-I AL862 Protein 1e-36 41
afaB ADD91742.1 putative AfaB-VIII periplasmic chaperone Not tested PAI-I AL862 Protein 1e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001992_10115 YP_007471765.1 fimbrial chaperone protein StiB VFG0445 Protein 2e-33 41