Gene Information

Name : CFSAN001992_10055 (CFSAN001992_10055)
Accession : YP_007471753.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Virulence
Product : chaperone protein EcpD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2008240 - 2008977 bp
Length : 738 bp
Strand : +
Note : COG3121 P pilus assembly protein, chaperone PapD

DNA sequence : 
ATGTCTCACTCTTTAAAGTTTACTTTGTCTGCTATCGCTCTGACCGGGGCATTATTTAGCTCTGCCAGCCAGGCCGATAT
TATTATTTCTGGCACGCGTATTATTTATGATGCAAATAAAAAAGATGTCAGCGTGCGTCTGGAAAATAAAGGTAAAAGCC
CATTATTAGTTCAGAACTGGATAGATCTCGGCAATGATAATGCCGAGCCGGGCAGTATTAAAGCGCCCTTCGCCGCCACG
CCGCCGGTATCACGAATAGAACCTAAGCGCGGGCAGTCGATAAAAATTATGTATACCGCCACAGAATCGCTACCGAAAGA
TCGCGAAAGCGTTTTCTGGTTCAACGTGCTGGAAGTTCCACCGAAGGCAAATACCAACCAGGAAGAAAATAAGAATTTGC
TCCAGCTGGCGTTTCGCACCCGCATCAAACTATTTTATCGCCCGACGGGTTTACCGGGCGCCCCGGCAGAAGCGGCAAAA
CAGCTGAAATGGCAGGTCGCCAGCGAACAGGGCCATGCCGTTCTTCGCGCCGATAACCCGACTCCGTATTACGTCTCCTT
TAACTCTGCCACCTACACCAGCGGCGGAAAACGCTATGACGTCGACGCGACCATGGTTGCCCCCTTTGGCAAAGCCGCCT
TCACGGTGAAAGGACTGCAAAACGCCAGCGCAGGCAAACTGGAATTCCAGTCCATTAATGACTACGGCGGCATCATCGCT
GGCTCAGCTTCACTGTAA

Protein sequence : 
MSHSLKFTLSAIALTGALFSSASQADIIISGTRIIYDANKKDVSVRLENKGKSPLLVQNWIDLGNDNAEPGSIKAPFAAT
PPVSRIEPKRGQSIKIMYTATESLPKDRESVFWFNVLEVPPKANTNQEENKNLLQLAFRTRIKLFYRPTGLPGAPAEAAK
QLKWQVASEQGHAVLRADNPTPYYVSFNSATYTSGGKRYDVDATMVAPFGKAAFTVKGLQNASAGKLEFQSINDYGGIIA
GSASL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ecpD1 AAO49832.1 pilin chaperone ecpD1 Not tested SPI-3 Protein 1e-71 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001992_10055 YP_007471753.1 chaperone protein EcpD VFG1145 Protein 1e-40 43
CFSAN001992_10055 YP_007471753.1 chaperone protein EcpD VFG0007 Protein 5e-42 41