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Name : CFSAN001992_09575 (CFSAN001992_09575) Accession : YP_007471661.1 Strain : Salmonella enterica CFSAN001992 Genome accession: NC_020307 Putative virulence/resistance : Unknown Product : prophage CPS-53 integrase Function : - COG functional category : - COG ID : - EC number : - Position : 1896734 - 1897906 bp Length : 1173 bp Strand : - Note : COG0582 Integrase DNA sequence : ATGAAACTAAATGCGCGACAGGTCGAGACGGCAAAGCCAGGCGAGAAAGACTACAAACTGCCAGACGGTAACGGGCTTAT TCTGCTGGTGAAAACCAGTGGAGCGAAATACTGGCGATATCGCTATACCTTCGCCGGTAGAGAAAAGATGCTGGCGCTCG GTGTATACCCGGCTGTTTCACTGGCCGCGGCTCGCGAAAAGCGAGATGAAGCCCGGCGAAATGTTGCAGCTGGTGTGGAT CCGGTAAAGGTCAAAAGCCACGTTGCAGCTGCCGCAGCAAACTCTATTACCTTTAAAGATATTGCCATCGAGTGGCATGA GTTTAAGAAGCCGCGCTGGTCGCCTGGCTATGCCTCTGACATTCTCGAAGCATTCAATAAGGATATTTTTCCGGCGGTTG GTAAGTTACCGGTTGCTGAGATTGAGCCCGTCCAGATGCTGACGGCGCTGCGTAAAATTGAGAATCGCGGCGCAACTGAG AAAGCAGCTAAAACGCGCCGATGGTGCGGCGAGGTATTCAGTTATGCTGTTGCGACCGGGCGCGCGAAGTACAACCCCGT CAGCGAACTGAATAGCGCAATGACCGGCCATAAAGGTGAATCCTTCCCGTTCCTGACAGCGGAAGAGCTACCCGATTTTC TGGCGGCGCTTGAGGGTTACAAGGGGAGTCCGCTTCCCCGGCTGGGTTTACAGATCATGATGCTGGCGGGGCTGCGTACC TACGAACTGCGGCACTCAAAATGGGAATGGGTAGATTTCGATAATCGGCTATGGGAGATACCCGCCGAATTTATGAAGAT GGATCGCCCGCACCTGGTACCGCTCTCCGATCAGCTTGTTGTCTTGCTGAAAGAGTTGCACGGTCTTACAGGTCGATTCG TGAATATGTTCCCCGGCAGGAATGACCCGTCAAAGGTCATGAGCGAGAACACAATAAACAGGATGATCCACACGCTGGGG TATAAGGGAAGGGTTGTAGGGCATGGCTTCCGGCATACGTTTAGCACCATACTGAACGATAGAGGATTCAACTCTGACTG GGTTGAACTCCAAATCGCTCATGTGGACAAGAATAATATTCGCGGGGTTTATAACCATGCCCTCTATATGGAAGGGCGTC GGGGAATGATGCAATGGTATGCGGATTTTATTGATCAACTGAGGTTGATTTAA Protein sequence : MKLNARQVETAKPGEKDYKLPDGNGLILLVKTSGAKYWRYRYTFAGREKMLALGVYPAVSLAAAREKRDEARRNVAAGVD PVKVKSHVAAAAANSITFKDIAIEWHEFKKPRWSPGYASDILEAFNKDIFPAVGKLPVAEIEPVQMLTALRKIENRGATE KAAKTRRWCGEVFSYAVATGRAKYNPVSELNSAMTGHKGESFPFLTAEELPDFLAALEGYKGSPLPRLGLQIMMLAGLRT YELRHSKWEWVDFDNRLWEIPAEFMKMDRPHLVPLSDQLVVLLKELHGLTGRFVNMFPGRNDPSKVMSENTINRMIHTLG YKGRVVGHGFRHTFSTILNDRGFNSDWVELQIAHVDKNNIRGVYNHALYMEGRRGMMQWYADFIDQLRLI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ESA_03025 | YP_001439090.1 | hypothetical protein | Not tested | Not named | Protein | 2e-110 | 59 |
| int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 2e-110 | 58 |
| int | CAC39282.1 | integrase | Not tested | LPA | Protein | 6e-111 | 58 |
| aec33 | AAW51716.1 | Int | Not tested | AGI-3 | Protein | 5e-111 | 58 |
| int | AAD54663.1 | Sai integrase | Not tested | SHI-2 | Protein | 1e-110 | 58 |
| S4835 | NP_839238.1 | integrase | Not tested | SHI-2 | Protein | 2e-110 | 58 |
| SF3698 | NP_709437.1 | integrase | Not tested | SHI-2 | Protein | 2e-110 | 58 |
| int | AAC31482.1 | CP4-like integrase | Not tested | LEE | Protein | 1e-108 | 57 |
| int | ACU09430.1 | integrase | Not tested | LEE | Protein | 1e-108 | 57 |
| intL | NP_290239.1 | integrase for prophage 933L and the LEE pathogenicity island | Not tested | LEE | Protein | 2e-108 | 57 |
| ECs4534 | NP_312561.1 | integrase | Not tested | LEE | Protein | 2e-108 | 57 |
| unnamed | AFX83955.1 | integrase | Not tested | SE-PAI | Protein | 3e-105 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CFSAN001992_09575 | YP_007471661.1 | prophage CPS-53 integrase | VFG0598 | Protein | 7e-111 | 58 |
| CFSAN001992_09575 | YP_007471661.1 | prophage CPS-53 integrase | VFG0783 | Protein | 6e-109 | 57 |
