Gene Information

Name : CFSAN001992_09565 (CFSAN001992_09565)
Accession : YP_007471659.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Virulence
Product : DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1896071 - 1896259 bp
Length : 189 bp
Strand : +
Note : COG3311 Predicted transcriptional regulator

DNA sequence :
ATGACACCGGTTATCTCTGATACTGACCTGATTAACATCAAAGAGGTTGAGCGCTCTGTTGGCCTGAAAAAATCCAGCAT
TTATGAGCGCATCAGTAATAACGAGTTTCCGAAGCCCAAGAAGCTCGGGAGCCGGACCTCCCGCTGGGTACGCGGCGAGG
TTGAAGAGTGGAAAAAGCAGTTTTTATAA

Protein sequence :
MTPVISDTDLINIKEVERSVGLKKSSIYERISNNEFPKPKKLGSRTSRWVRGEVEEWKKQFL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1188 NP_286723.1 hypothetical protein Not tested TAI Protein 1e-06 44
Z1627 NP_287131.1 hypothetical protein Not tested TAI Protein 1e-06 44
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 1e-06 44
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 6e-07 44
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 1e-06 44
unnamed CAD33739.1 hypothetical protein Not tested PAI I 536 Protein 2e-06 42
c5192 NP_757040.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-06 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001992_09565 YP_007471659.1 DNA-binding protein VFG1141 Protein 3e-07 44
CFSAN001992_09565 YP_007471659.1 DNA-binding protein VFG1480 Protein 8e-07 42