Gene Information

Name : CFSAN001992_00245 (CFSAN001992_00245)
Accession : YP_007469820.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Unknown
Product : helicase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 12632 - 14392 bp
Length : 1761 bp
Strand : -
Note : COG1061 DNA or RNA helicases of superfamily II

DNA sequence :
ATGATTTTTACACTCCGCCCCTACCAGCAAGAAGCCGTAGACGCCACGCTCAGCCACTTTCGCCGCCACCGTACGCCCGC
CGTGATTGTTCTGCCGACCGGCGCAGGTAAAAGCCTGGTGATCGCCGAACTGGCGCGCGTCGCCCGCGGACGGGTACTGG
TGCTGGCGCATGTGAAAGAGTTGGTCGCGCAGAACCACGCCAAATATTGCGCGCTGGGGCTGGAAGCGGATATTTTCGCC
GCCGGACTCAAACGTAAAGAGAGTCAGGGCAAAGTCGTGTTCGGCAGCGTACAGTCGGTGGCGCGTAATCTTGACGCCTT
CCAGGAGGAGTTTTCGCTGTTGATTGTCGATGAATGCCACCGCATCGGTGACGATGAAGACAGTCAGTATCAGCAAATCC
TCACTCACCTGAGTAAAGTTAATCCTCACTTACGTCTGCTTGGGCTAACCGCCACGCCTTTCCGCCTCGGAAAAGGCTGG
ATTTATCAATTTCATTACCACGGTATGGTGCGCGGCAACGACAACTCTCTGTTTCGCGACTGTATTTATGAACTGCCGCT
GCGCTATATGATTAAACACGGCTATCTGACGCCGCCTGAGCGGCTTGATATGCCAGTGGTCCAATACGATTTCAGCTGCC
TGCAGGCCCAAAGCAATGGGCTGTTCAGCGAAGCCGACCTGAACCGCGAGCTGAAAAAGCAGCAGCGGATTACGCCGCAC
ATCATCAGCCAGATTATGGAATTTGCGCAAACGCGCAAAGGCGTGATGATTTTCGCCGCCACGGTCGAACATGCGAAAGA
GATTGTCGGTCTGCTTCCGGCGGACGACGCGGCGCTGATTACCGGCGATACGCCAGGGCCCGAGCGCGACGCGCTGATTG
ATAATTTCAAGGCGCAGCGTTTTCGCTATCTGGTTAACGTCTCGGTGCTGACCACCGGCTTTGACGCCCCACACGTTGAT
CTCATCGCGATTCTACGTCCCACCGAGTCAGTTAGTCTTTACCAACAAATTGTCGGGCGTGGTCTGCGCCTTGCGCCGGG
AAAGACCGATTGCCTGATTCTTGATTACGTAGGCAACCCGCACGACCTGTATGCCCCGGAGGTCGGTAGCCCGAAGGGAA
AAAGCGATAACGTCCCTGTCCAGGTATTTTGCCCGGCCTGCGGCTTTGCCAACACCTTCTGGGGGAAAACCACTGCCGAC
GGCACGCTGATTGAACACTTTGGCCGTCGCTGCCAGGGCTGGTTTGACGATGACGACGGCCATCGCGAGCAGTGCGATTT
TCGCTTTCGCTTCAAAAACTGCCCGCAGTGTAATGCCGAAAACGATATTGCCGCCCGACGCTGCCGGGAATGTGACGCCA
TTCTGGTCGACCCGGACGATATGTTAAAAGCGGCGCTCAGGCTCAAGGATGCGTTAGTCCTGCGCTGTAGCGGAATGACG
ATGCAGCATGGGCAGGATGAGAAAGGCGAATGGCTGAAAATCACTTACTATGACGAGGACGGCGCGGATGTCAGTGAGCG
CTTCCGCTTGCACACGCCCGCCCAGCGTACCGCTTTCGAACAGCTATTTATTCGCCCGCATACGCGCACGCCCGGCGTTC
CTTTACGCTGGATCACGGCGGCGGATATTGTCGCGCAGCAGGCGCTGTTGCGGCATCCCGATTTTGTGGTCGCGCGGATG
AAAGGCCAGTACTGGCAGGTGCGTGAAAAAGTGTTCGACTATGAAGGCCGCTTCCGCCGGGCGCACGAATTACGTGGTTA
A

Protein sequence :
MIFTLRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAHVKELVAQNHAKYCALGLEADIFA
AGLKRKESQGKVVFGSVQSVARNLDAFQEEFSLLIVDECHRIGDDEDSQYQQILTHLSKVNPHLRLLGLTATPFRLGKGW
IYQFHYHGMVRGNDNSLFRDCIYELPLRYMIKHGYLTPPERLDMPVVQYDFSCLQAQSNGLFSEADLNRELKKQQRITPH
IISQIMEFAQTRKGVMIFAATVEHAKEIVGLLPADDAALITGDTPGPERDALIDNFKAQRFRYLVNVSVLTTGFDAPHVD
LIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYVGNPHDLYAPEVGSPKGKSDNVPVQVFCPACGFANTFWGKTTAD
GTLIEHFGRRCQGWFDDDDGHREQCDFRFRFKNCPQCNAENDIAARRCRECDAILVDPDDMLKAALRLKDALVLRCSGMT
MQHGQDEKGEWLKITYYDEDGADVSERFRLHTPAQRTAFEQLFIRPHTRTPGVPLRWITAADIVAQQALLRHPDFVVARM
KGQYWQVREKVFDYEGRFRRAHELRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_01052 YP_001437156.1 hypothetical protein Not tested Not named Protein 0.0 89