Gene Information

Name : ribD (CFSAN001992_09115)
Accession : YP_007471569.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Unknown
Product : bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase
Function : -
COG functional category : -
COG ID : -
EC number : 3.5.4.26
Position : 1799264 - 1800367 bp
Length : 1104 bp
Strand : -
Note : COG0117 Pyrimidine deaminase

DNA sequence : 
ATGCAGGATGAATTTTACATGGCGCGAGCGCTAAAACTGGCGCAGCGTGGGCGTTTCACCACTCACCCGAACCCTAATGT
CGGCTGTGTCATTGTTAACAATGGCGACATCGTCGGCGAAGGTTATCACCAGCGCGCCGGAGAGCCGCACGCCGAGGTCC
ATGCGCTGCGGATGGCGGGCGCAAAAGCCAAAGGCGCAACCGCCTATGTCACGCTTGAACCCTGTAGCCATCATGGGCGA
ACGCCGCCATGTTGCGATGCGCTGATTGCGGCCGGCGTCGCGCGCGTGGTCGCCGCGATGCAGGACCCAAATCCACAGGT
CGCCGGGCGCGGGCTGTATCGCCTGCAACAGGCGGGTATTGCGGTCAGCCACGGGTTAATGATGAGTGAAGCGGAGGCGC
TCAATAAAGGCTTCCTCAAGCGGATGCGTACCGGATTCCCTTATCTTCAGCTTAAACTGGGCGCCTCCGTGGATGGACGG
ACGGCGATGGCCAGCGGCGAAAGCCAGTGGATCACCTCGCCGCAGGCCCGGCGCGACGTTCAGCGCTTGCGTGCGCAAAG
TCACGCTATCTTAACCAGTAGCGCGACGGTATTGGCTGACGATCCGGCCTTGACGGTGCGTTGGACAGAGTTAGACGCTT
CTACGCAGGCGTCTTACCCGCAGGAAAATCTGCGCCAGCCGGTGCGAATTGTTATCGACAGCCAAAACCGGGTAACGCCT
GCGCATCGTATTGTGCAGCAGCCTGGCGAAACGTGGATCGCGCGTACCCAGGAAGATAGCCGCGCGTGGCCCGATGCGGT
TCGTACTATCAGCGTACCAGCGCACAACGGACATTTGGATCTGGTTGTGCTGATGATGCAGTTAGGCAGGCAGCAGATTA
ATAGCATATGGGTTGAAGCCGGACCGGGACTGGCGGGCGCGTTGCTGCAAGCCGGGCTGGTGGATGAACTGATTGTCTAT
GTCGCGCCTAAATTGTTGGGAACCCAGGCGCGGGGATTATGCGAATTGCCGGGGCTTGAGAGGCTCGCCGACGCGCCGCA
ATTTACCTTCAGCGAAATACGACATGTCGGCCCGGATGTTTGCCTGCATATGGTGAGCGCATGA

Protein sequence : 
MQDEFYMARALKLAQRGRFTTHPNPNVGCVIVNNGDIVGEGYHQRAGEPHAEVHALRMAGAKAKGATAYVTLEPCSHHGR
TPPCCDALIAAGVARVVAAMQDPNPQVAGRGLYRLQQAGIAVSHGLMMSEAEALNKGFLKRMRTGFPYLQLKLGASVDGR
TAMASGESQWITSPQARRDVQRLRAQSHAILTSSATVLADDPALTVRWTELDASTQASYPQENLRQPVRIVIDSQNRVTP
AHRIVQQPGETWIARTQEDSRAWPDAVRTISVPAHNGHLDLVVLMMQLGRQQINSIWVEAGPGLAGALLQAGLVDELIVY
VAPKLLGTQARGLCELPGLERLADAPQFTFSEIRHVGPDVCLHMVSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 3e-57 45
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 3e-57 45