Gene Information

Name : CFSAN001992_08310 (CFSAN001992_08310)
Accession : YP_007471412.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1635778 - 1636407 bp
Length : 630 bp
Strand : +
Note : COG1475 Predicted transcriptional regulators

DNA sequence :
ATGGGGGATCTTATGCAACACCGACTCACAGCCGAAATAACTCACTTTCTCTCTGAACTGCCTGAAGAGGAGAGGATCGC
CGCCATTAATGAATTTAGAATGGCGATACATAGCGTTAGTCCTTTTCGCGACGAGCCTGTCGATTGTGTCCTGTGGGTGA
AAAACGATCATATTTCGCCTAATGACTACAACCCGAATAACGTTGCGCCGCCGGAGAAAAAACTGCTGCTTAAATCGATT
GAACAAGATGGATTTACTCAGCCGATAGTGGTGGTAAAGGCCGATGCCGAGGAGTACGAGATTGTGGACGGTTTTCACCG
TCATGAGCTGGGCAAAGGAAAAACGGTCCTGAAAAGGCGTCTGAAAGGCTACCTGCCGATAACGTGTCTGGACAGAGAAC
GTCACGAACGCATGGCGGCAACCATTCGGCATAACCGCGCGCGCGGACGCCACCAGATCCACGCCATGTCAGAAATAGTG
CGCGAACTTTCTCTGCTAGGCTGGGACGAAAGCAAAATCGGCCAGGAGTTAGGTATGGACGCCGATGAAGTCCTGCGCCT
GAAACAGATCAACGGCCTGCAGGAGCTTTTTGCAGACCGTCGATTCTCCAGAGCGTGGACGGTTAAATAA

Protein sequence :
MGDLMQHRLTAEITHFLSELPEEERIAAINEFRMAIHSVSPFRDEPVDCVLWVKNDHISPNDYNPNNVAPPEKKLLLKSI
EQDGFTQPIVVVKADAEEYEIVDGFHRHELGKGKTVLKRRLKGYLPITCLDRERHERMAATIRHNRARGRHQIHAMSEIV
RELSLLGWDESKIGQELGMDADEVLRLKQINGLQELFADRRFSRAWTVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 2e-55 60
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 1e-54 58
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 1e-54 58
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 1e-54 58
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 1e-54 58
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 5e-55 57
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-42 57
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-42 57
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-42 57
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 1e-55 56
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 2e-30 52
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 4e-31 51
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 7e-31 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001992_08310 YP_007471412.1 hypothetical protein VFG1505 Protein 8e-56 60