Gene Information

Name : CFSAN001992_06190 (CFSAN001992_06190)
Accession : YP_007470994.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Virulence
Product : type III secretion chaperone protein SigE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1194529 - 1194870 bp
Length : 342 bp
Strand : +
Note : -

DNA sequence :
ATGGAAAATTTATTAAATCGTTTATATGCCGCGTTAGGCCTGGATGCGCCAGAAGATGAGCCACTGCTTATCATTGATGA
TGGGATACAGGTTTATTTTAATGAATCCGATCATACACTGGAAATGTGCTGTCCCTTTATGCCATTGCCTGACGACATCC
TGACTTTGCAGCATTTTTTACGTCTTAACTACACCAGCGCCGTCACTATCGGCGCTGACGCAGACAATACTGCTTTAGTG
GCGCTTTATCGCTTGCCGCAAACCAGTACCGAAGAAGAGGCGCTCACTGGTTTTGAATTATTCATTTCAAACGTGAAGCA
ATTGAAAGAGCATTATGCATAA

Protein sequence :
MENLLNRLYAALGLDAPEDEPLLIIDDGIQVYFNESDHTLEMCCPFMPLPDDILTLQHFLRLNYTSAVTIGADADNTALV
ALYRLPQTSTEEEALTGFELFISNVKQLKEHYA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pipC YP_216029.1 hypothetical protein Virulence SPI-5 Protein 5e-47 99
pipC NP_460063.1 pathogenicity island-encoded protein C Virulence SPI-5 Protein 5e-47 99
pipC AAC33724.1 PipC Virulence SPI-5 Protein 2e-47 99
sigE NP_455587.1 cell invasion protein Virulence SPI-5 Protein 2e-46 97
sigE AAS66828.1 SigE Not tested SSR-1 Protein 3e-20 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001992_06190 YP_007470994.1 type III secretion chaperone protein SigE VFG0591 Protein 1e-47 99