Gene Information

Name : CFSAN001992_05355 (CFSAN001992_05355)
Accession : YP_007470829.1
Strain : Salmonella enterica CFSAN001992
Genome accession: NC_020307
Putative virulence/resistance : Virulence
Product : Attachment invasion locus protein precursor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1031412 - 1031969 bp
Length : 558 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAATATTATTTTATCCACTTTAGTTATTACTACAGGCGTTTTGGTTGTAAATGTTGCACAGGCCGATACTAACGC
CTTTTCCGTGGGGTATGCACAAAGTAAAGTTCAGGATTTCAAAAATATCCGAGGGGTAAATGTGAAATATCGTTATGAGG
ATGACTCTCCGGTAAGTTTTATTTCCTCGCTAAGTTACTTATATGGAGACAGACAGGCTTCCGGGTCTGTTGAGCCTGAA
GGTATTCATTACCATGACAAGTTTGAGGTGAAGTACGGCTCTTTTATGGTTGGGCCAGCCTATCGATTGTCTGACAATTT
TTCGTTATACGCGCTGGCAGGTGTCGGCACGGTAAAGGCGACGTTTAAAGAACATTCCACTCAGGATGGCGATTCTTTTT
CTAACAAAATTTCCTCAAGGAAAACGGGATTTGCCTGGGGCGCAGGTGTACAGATGAATCCGCTGGAGAATATCGTCGTC
GATGTTGGGTATGAAGGAAGCAACATCTCCTCTACAAAAATAAACGGCTTCAACGTCGGGGTTGGATACCGTTTCTGA

Protein sequence : 
MKNIILSTLVITTGVLVVNVAQADTNAFSVGYAQSKVQDFKNIRGVNVKYRYEDDSPVSFISSLSYLYGDRQASGSVEPE
GIHYHDKFEVKYGSFMVGPAYRLSDNFSLYALAGVGTVKATFKEHSTQDGDSFSNKISSRKTGFAWGAGVQMNPLENIVV
DVGYEGSNISSTKINGFNVGVGYRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pagC YP_216243.1 PhoP regulated protein: reduced macrophage survival Not tested SPI-11 Protein 5e-80 99
Z4321 NP_289546.1 PagC-like membrane protein Not tested OI-122 Protein 2e-28 48
Z4321 AAQ19134.1 putative PagC-like membrane protein Not tested PAI I CL3 Protein 4e-28 47
unnamed ADD91732.1 putative PagC-like membrane protein Not tested PAI-I AL862 Protein 6e-29 46
pagC AGI37346.1 PagC Virulence OI-122 Protein 4e-20 43
pagC AGI37350.1 PagC Virulence OI-122 Protein 4e-20 43
pagC AGI37340.1 PagC Virulence OI-122 Protein 3e-20 43
pagC AGI37341.1 PagC Virulence OI-122 Protein 1e-19 43
pagC AGI37347.1 PagC Virulence OI-122 Protein 3e-20 43
pagC AGI37349.1 PagC Virulence OI-122 Protein 1e-19 43
pagC AGI37348.1 PagC Virulence OI-122 Protein 1e-20 43
pagC AGI37352.1 PagC Virulence OI-122 Protein 1e-19 43
pagC AGI37351.1 PagC Virulence OI-122 Protein 9e-21 43
pagC AGI37337.1 PagC Virulence OI-122 Protein 4e-20 43
pagC AGI37342.1 PagC Virulence OI-122 Protein 4e-20 43
pagC AGI37344.1 PagC Virulence OI-122 Protein 4e-20 43
pagC AGI37343.1 PagC Virulence OI-122 Protein 2e-19 42
pagC AGI37353.1 PagC Virulence OI-122 Protein 2e-19 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001992_05355 YP_007470829.1 Attachment invasion locus protein precursor VFG0442 Protein 2e-38 54