Gene Information

Name : CFSAN001992_00125 (CFSAN001992_00125)
Accession : YP_007469798.1
Strain :
Genome accession: NC_020306
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 17892 - 18239 bp
Length : 348 bp
Strand : -
Note : COG2963 Transposase and inactivated derivatives

DNA sequence :
ATGACCGGGATCCTGTTAGGGCAAGAAGCCCGCAAACGTAAGCCTCCTCAGGAGAAAATCGCCATTATCCAGCAGACGAT
GGAGCCAGGCATGAATGTATCTCCGCTCGTCTGCACGGTATTCAGCCCAGCCTGCTGTTCAAGTGGAAGACGCAATACGA
GGAATGCTGCCGGAGAAGAAGTCGTGCCAGCCTCAGAGTTCACAGCCGCACTAAAGCATGTTCGGGAGATTCAGCTCCTC
CTGGGCAAGAAGACGATGGCGGTAGAGATCCTCAAAGAAGTCGTGGAGAACGTCCAGTCGCGAAAATGGATAGCGCACGC
GCCCTTGTTGCCAAAGGACGGGGCATAG

Protein sequence :
MTGILLGQEARKRKPPQEKIAIIQQTMEPGMNVSPLVCTVFSPACCSSGRRNTRNAAGEEVVPASEFTAALKHVREIQLL
LGKKTMAVEILKEVVENVQSRKWIAHAPLLPKDGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpG AAD44740.1 TnpG Not tested SHI-2 Protein 3e-21 53
S4049 NP_839217.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 6e-21 53
unnamed AAL57520.1 IS2 transposase Not tested LEE Protein 3e-21 53
st02 CAC81840.1 ST02 protein Not tested LEE II Protein 3e-21 53
ECO26_5247 YP_003232129.1 insertion sequence 2 OrfA protein Not tested LEE Protein 4e-21 53
S3188 NP_838471.2 insertion sequence 2 OrfA protein Not tested SHI-1 Protein 4e-21 53
S4060 NP_839229.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 4e-21 53
SF3722 NP_709461.3 IS2 ORF1 Not tested SHI-2 Protein 1e-20 53
SF2984 NP_708758.3 IS2 ORF1 Not tested SHI-1 Protein 6e-21 53
SF3709 NP_709448.3 IS2 ORF1 Not tested SHI-2 Protein 1e-20 53
aec50 AAW51733.1 Aec50 Not tested AGI-3 Protein 4e-21 53
unnamed AAL67376.1 insertion sequence protein Not tested PAI II CFT073 Protein 6e-11 47
insC YP_002414034.1 IS2 insertion element repressor InsA; KpLE2 phage-like element Not tested Not named Protein 1e-10 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CFSAN001992_00125 YP_007469798.1 putative transposase VFG0609 Protein 3e-21 53
CFSAN001992_00125 YP_007469798.1 putative transposase VFG0648 Protein 2e-21 53
CFSAN001992_00125 YP_007469798.1 putative transposase VFG0622 Protein 3e-21 53
CFSAN001992_00125 YP_007469798.1 putative transposase VFG1733 Protein 4e-11 47