Gene Information

Name : UWK_00086 (UWK_00086)
Accession : YP_007466327.1
Strain : Desulfocapsa sulfexigens DSM 10523
Genome accession: NC_020304
Putative virulence/resistance : Unknown
Product : RNAse PH
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.56
Position : 105596 - 106294 bp
Length : 699 bp
Strand : -
Note : PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH

DNA sequence :
ATGAGTCGTTTTCAAAACCGGGCACCGGACAGTCTGCGGGATGTGTCACTTGTATGGGATTTTCAGCCGGGAGCGGATGC
CTCCTTGCTGATTCGCATGGGGGGAACCCATGTGATCTGCGGAATAAGTGTTGAAGAAAAAGTCCCACCATTTTTAAAGG
ATAGCGGGAAGGGTTGGATTACTGCGGAATATGGAATGCTGCCCTGTGCCACAAACTCACGTTACAGGCGTGAAATTGGT
GGACGATCCGGCAGAACCTATGAAATCCAGCGACTTATCGGACGCAGCCTGCGAATGATGGTTGATCTCAATGCCATCGG
AGAGCGAACCCTGCGAGTTGATTGTGATGTGTTAAACGCGGATGGTGGAACCCGTACCGCATCAATTACCGGTGGGGCGC
TTGCATTACGCCATGTATTGCAGAAGCTTGTAGTAGGTGGAAAACTCGCTGAAATGCCTAAGATTCTTCCTGTTGCCGCA
ATTTCAGTTGGTATTATCGATGGTGAGGCCTGTCTTGATCTTGATTATTCTGAAGATTCCAGCGCCGAGGTGGATGCAAA
TTTTGTCATGAGCGGGGATGGGCGCTGGATTGAAATCCAGTCAACCGCAGAAGGCACACCCTTCAGTCCGGAATCCTTTA
TGGCCATGACCGCTCTTGCTGAAAAAGGAATTCAGGAACTCTTTCAACTCTGGAAATAG

Protein sequence :
MSRFQNRAPDSLRDVSLVWDFQPGADASLLIRMGGTHVICGISVEEKVPPFLKDSGKGWITAEYGMLPCATNSRYRREIG
GRSGRTYEIQRLIGRSLRMMVDLNAIGERTLRVDCDVLNADGGTRTASITGGALALRHVLQKLVVGGKLAEMPKILPVAA
ISVGIIDGEACLDLDYSEDSSAEVDANFVMSGDGRWIEIQSTAEGTPFSPESFMAMTALAEKGIQELFQLWK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 7e-50 51