Gene Information

Name : UWK_00354 (UWK_00354)
Accession : YP_007466592.1
Strain : Desulfocapsa sulfexigens DSM 10523
Genome accession: NC_020304
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 414715 - 415428 bp
Length : 714 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence :

ATGAATTGGAATGGGAAAAATACTATGTCCAGTAAAGGGCTCGAAGCTTTTCATCTGTGTAAGTCCTACATTGTTGGCTC
CAGGAAAATTCTTGTCCTTGATGATGTCAGCCTTACCGTTCAAATCGGCGGTTTTGTCGTTGTTGAAGGAAAAAGCGGCA
GCGGGAAATCAACGCTGTTGAGTCTTCTTTCAGGACTGGACAGACCGGATTCGGGGACAATAGGTCTTTCGGGAACCGAC
ATTACCAATTTAAGTGAGGATGCACTTGCTCCCTTTCGGAACCGGACAATCGGTTATGTCTTCCAGTCTTTCCACCTTGT
TCCTTCCCTCACTGCCATAGAGAATATTGCCTTCCCCGCCGAATTAAACCGGGATCCGCAGGCTGTTCAGAAGGCAGAAG
AGTTACTGCATAGGGTGGGACTGAGCCAGAGAAAGAATAATTTCCCCCACCAGCTTTCCGGAGGAGAAAAGCAGCGGATT
GCTATCTGCCGGGCTTTGATCAACAAGCCGCAGATCGTCTTTGCCGACGAACCCACCGGGAATCTGGATTCGGCAAATGG
CAAAAACATTATGGAACTCCTGCTCGAACTGCGCCGGGAGTTCAAAACGACACTGGTGCTGGCTACCCACAGTAGCGAGA
TAAGCCGCCAGGCGGATCATGTCTTTCGGCTGCTAGATGGCAGGATGATCCACTCTCAAGAGGATGAAGACTGA

Protein sequence :

MNWNGKNTMSSKGLEAFHLCKSYIVGSRKILVLDDVSLTVQIGGFVVVEGKSGSGKSTLLSLLSGLDRPDSGTIGLSGTD
ITNLSEDALAPFRNRTIGYVFQSFHLVPSLTAIENIAFPAELNRDPQAVQKAEELLHRVGLSQRKNNFPHQLSGGEKQRI
AICRALINKPQIVFADEPTGNLDSANGKNIMELLLELRREFKTTLVLATHSSEISRQADHVFRLLDGRMIHSQEDED

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
Cp1002_1464	YP_005681730.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	8e-27	45
CpC231_1466	YP_005683828.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	6e-28	43
cpfrc_01473	YP_003783873.1	hypothetical protein	Not tested	PiCp 5	Protein	6e-28	43
CpI19_1473	YP_005685914.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	6e-28	43

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
UWK_00354	YP_007466592.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_008702.1.4606598.	Protein	6e-28	45
UWK_00354	YP_007466592.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_012469.1.7686878.	Protein	2e-31	45
UWK_00354	YP_007466592.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene598.p	Protein	4e-33	43
UWK_00354	YP_007466592.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene798.p	Protein	1e-33	43