Gene Information

Name : UWK_03089 (UWK_03089)
Accession : YP_007469271.1
Strain : Desulfocapsa sulfexigens DSM 10523
Genome accession: NC_020304
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliQ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3430465 - 3430728 bp
Length : 264 bp
Strand : +
Note : PFAM: Bacterial export proteins, family 3; TIGRFAM: flagellar biosynthetic protein FliQ

DNA sequence :
ATGACAGACGAATTTGTTGTAGATATCTGCAGAAAAGCGATCCAGACTGCTCTTATGATTTCCGGTCCGATGCTCCTAGC
CGGAATGATTATAGGACTCATCGTATCAATTTTTCAGGCAACAACACAAATAAACGAACAAACTCTGACCTTTATCCCAA
AAATTATCGCTGTTTTTATTACGCTCCTTCTCATGACCCCCTGGATGATTCACACGATGACATCCTTTGCAACAGCAATT
TTCACAACCATAGCGACCTTTTAA

Protein sequence :
MTDEFVVDICRKAIQTALMISGPMLLAGMIIGLIVSIFQATTQINEQTLTFIPKIIAVFITLLLMTPWMIHTMTSFATAI
FTTIATF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escS AFO66341.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 6e-09 44
escS AFO66401.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 6e-09 44
escS AAC31527.1 L0048 Virulence LEE Protein 6e-08 43
escS YP_003236102.1 T3SS structure protein EscS Virulence LEE Protein 8e-08 43
escS ACU09472.1 hypothetical protein Not tested LEE Protein 6e-08 43
escS NP_290282.1 hypothetical protein Virulence LEE Protein 8e-08 43
unnamed AAL06355.1 EscS Virulence LEE Protein 3e-08 43
ECs4582 NP_312609.1 EscS Virulence LEE Protein 8e-08 43
escS AAC38370.1 EscS Virulence LEE Protein 6e-08 43
escS CAI43888.1 EscS protein Virulence LEE Protein 1e-07 41
escS AAK26701.1 EscS Virulence LEE Protein 6e-08 41
escS AAL57528.1 EscS Virulence LEE Protein 6e-08 41
escS CAC81848.1 EscS protein Virulence LEE II Protein 6e-08 41
escS YP_003223489.1 T3SS structure protein EscS Virulence LEE Protein 9e-08 41
escS YP_003232139.1 T3SS structure protein EscS Virulence LEE Protein 9e-08 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UWK_03089 YP_007469271.1 flagellar biosynthetic protein FliQ VFG2015 Protein 5e-10 43
UWK_03089 YP_007469271.1 flagellar biosynthetic protein FliQ VFG0716 Protein 2e-08 43
UWK_03089 YP_007469271.1 flagellar biosynthetic protein FliQ VFG0826 Protein 2e-08 43