Gene Information

Name : UWK_02986 (UWK_02986)
Accession : YP_007469168.1
Strain : Desulfocapsa sulfexigens DSM 10523
Genome accession: NC_020304
Putative virulence/resistance : Virulence
Product : CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3311352 - 3312761 bp
Length : 1410 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Sigma-54 interaction domain

DNA sequence :
ATGAAACGAAATATTCTCCTCATAGAAGACGAACTCTCCATGCGGCTTGGAGTCAGTCACTCTCTCAGCGGACACGGCTA
CGAGGTGACTGCCTGTGAAGATGGCATAGAGGGGCTAAAAGCTATACAGCAACATAACTTTGACCTAATTATTACAGACT
TCAGGCTCCCAGGGATGAGCGGCATGGAGATACTTACTGAATCCATGAAAATTTGTCCTGATACGGGTGTTATCATCATT
ACTGGTTTTCCAGAGGTAGATACTGCAGTGTCTGCCATAAAAAAAGGAGCCTTCGACTACCTGAGTAAACCCTTTAGTAA
CGACACTCTTCTTATTGTTGTGGACCGGTATTTCAGATACAGGCAACTCCAGCTTGAAAATGATCAGCTCCGTGAAACCG
TCCGAGAAAAGAGTCAGTCTGAGGAGTTTATTGGAGAAAGCTCGGCCATTAAGGCCGTATTTGATCGCTTGGCCACCGTT
GCCCCAACCGATGTCCCGGTTCGTATCCAGGGAGAAAGTGGTACAGGTAAGGAACTAGTGGCCAGCGCTCTCCACAGATT
GAGCCTTCGTAAAGACAAGACTTTTCTCAAGATTAATTGTGCTGCTATCCCTGAAGATCTTCTTGAATCTGAACTCTTTG
GTTACGAAAAAGGTGCTTTCACCGGTGCTGTCCAGTCGAAAAAGGGTAAATTCGAAGTGGCGGATGGAGGAACTATTTTT
TTTGATGAGATTGGGGAGATGCCCATCACTCTGCAGGCAAAGCTTCTCAGAGTGCTTGAAGAACATGAACTCACCAGATT
AGGGAGCAATACCAGTATCAAGATAGATGTACGGACAATTTTTGCCACGGCCAAGGATCTGAAAAAAGCTATTAGCGAAC
GGACGTTCAGAGAGGATCTGTTTTACAGGATCAATGTTGTCCCCATCCATTTGCCGCCGTTACGTGAGCGGGGCGAAGAC
ATAACCGCCCTTGCTGAGCATTTTCTTAAAATTTATTCCACAAAGTACAGAAAAAAAGGGCTGGATATTTCTCCAGATGC
CTATAAAAGGCTTCTGGCCTATGACTATCCGGGGAATGTGAGGGAACTCAAGAATGCCATAGAGAGAGCAGTTCTTCTCT
CTACCGGAAGTCATATATATGTGACACACCTGCCTTCGGAATGTAGGGGGGGGGCGAAGATCTTCCTTGTATTACCGAAG
ACCTGTCTTTGGATGAGGGGGTTAAATGTTACGAACGACAGAGAATCCTTAAGACTCTTGATGAGACGGACGGAAAAAAA
ATTGCAGCTGCCGACAAACTTGGTATCAGCAGAAAGGTTCTTTGGAAAAAACTTAAGGATCTGGGTATCGAGTGTTAGGC
TGTATTGTTCGACTCGCCTGAGATGTTCTTTTTCACGATATGACAGATAG

Protein sequence :
MKRNILLIEDELSMRLGVSHSLSGHGYEVTACEDGIEGLKAIQQHNFDLIITDFRLPGMSGMEILTESMKICPDTGVIII
TGFPEVDTAVSAIKKGAFDYLSKPFSNDTLLIVVDRYFRYRQLQLENDQLRETVREKSQSEEFIGESSAIKAVFDRLATV
APTDVPVRIQGESGTGKELVASALHRLSLRKDKTFLKINCAAIPEDLLESELFGYEKGAFTGAVQSKKGKFEVADGGTIF
FDEIGEMPITLQAKLLRVLEEHELTRLGSNTSIKIDVRTIFATAKDLKKAISERTFREDLFYRINVVPIHLPPLRERGED
ITALAEHFLKIYSTKYRKKGLDISPDAYKRLLAYDYPGNVRELKNAIERAVLLSTGSHIYVTHLPSECRGGAKIFLVLPK
TCLWMRGLNVTNDRESLRLLMRRTEKKLQLPTNLVSAERFFGKNLRIWVSSVRLYCSTRLRCSFSRYDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 1e-57 41
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 1e-57 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UWK_02986 YP_007469168.1 CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator BAC0089 Protein 1e-81 46
UWK_02986 YP_007469168.1 CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator BAC0467 Protein 4e-73 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UWK_02986 YP_007469168.1 CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator VFG1249 Protein 3e-68 42
UWK_02986 YP_007469168.1 CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator VFG0116 Protein 1e-62 41