|
Name : UWK_02947 (UWK_02947) Accession : YP_007469130.1 Strain : Desulfocapsa sulfexigens DSM 10523 Genome accession: NC_020304 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : - COG ID : - EC number : - Position : 3272138 - 3273691 bp Length : 1554 bp Strand : - Note : PFAM: Sigma-70, region 4; Integrase core domain DNA sequence : ATGCCGAAGAAGAGGTTATCTATGCGAAAAATTAGAGAGGTACTACGACTCAAGTATGAACTTGGGCACAGTAACCGTGA AATTTCCCGTAGCTGCGGTATTGGCAGCAGCACGGTAAGTGACTATTTACAACGAACCAAAAGAGCAGATCTGGGTTGGC CCCTTCCTGACGACCTAAGCGACAGCAGCCTTGAACAAACCCTTTTCCCTCCACCGCCTCCACCGGGGACAAGCCGGCTA ATTCCAGATTTCTCTGAGATCCACAAAGAGCTCCAATCCAAACGAGGGGTTACCCTGAACCTGCTGTGGCAGGAATACAA AGAGCAGCATCCTGACGGCTACCAGTACAGCTGGTTCTGCCATAGTTACCGGGATTGGGCCGGCAAGCTTGATCTGGTCA TGCGCCATGAACACCGAGCCGGTGAGAAACTGTTTGTCGACTACGCAGGCCAAACCGTCGATGTCGTTGACCAACACACC GGAGAAATCACAAAGGCTCAGGTCTTTGTTGCGGTCCTTGGTGCCAGCAACTACACCTATGCTGAGGCCACTCCCAGCCA GAAGATTGAGGATTGGATCGGTTCACATGTCCGTACATTTGCTTTCCTGGGTGGGGTTCCGGAAGTTGTCGTTCCAGATA ACCTGAAAAGTGGCGTCACAAAAGCCTGCCGTTACGAACCTGACCTTAATCCCACTTATCATGATCTGGCCCGACATTAT CAAACCGTGGTGCTGCCTGCAAGGGTTAGAAAACCAAGGGACAAGGCCAAGGCTGAGGCCGGTGTATTGCTGGTGGAACG CTGGATTCTGGCAAAACTCCGTAAACATACTTTCTTCAACATTGACGATCTCAATCGCGAAATAGGCAAACTCCTTGAGC AACTGAACAACAAGCCTTTCAAGAAGTTATCCGGCAGCCGTAAAAGTCGCTTTGAAGAACTGGACAAACCTGCCCTGAAA CAACTTCCAGCCAGCCCTTATGAATTATCCTACTGGAAAAAGGCCACTGTACATATCGACTATCATGTGGAGGTCGAGGG ACATTACTATTCCGTTCCATATAACCTGGTCAAAAAACAGATTGAGGTGCGCTATACCAAAAGCACGGTTGAGTGTTACT TTCGTGGTAAACGGGTGGCCAGTCACATCCGGGAGAATCAACGAGGGCACCACACTACCGTCAAAGAGCATATGCCTGTC AACCACCGAAAGTACATGGAGTGGAATCCGGACAGGTTCAAGCGCTGGGCTGCCAAGGTCGGGCCGGAGACACTCTGCCT CACAGAGACGCTTCTTGTAAAAAGAGCTCACCCACAACAGGCCTATCGCACTTTGCTGGGCATTCTCCGTCTTGGCAAAG CCTATGGAGATTCACGCCTTGAGGCAGCATGCCATCGGGCCCTGCATATCAACGCCCTTTCTTACCGCTCAGTGGAATCC ATACTCAAAAGCGGCCTTGATCAGAAGCCACTACCGAAGCCGGCTACAGAGGACAAGCCGGTTAATCACGCAAATATCCG TGGCTCTCAGTATTATTCTCCCTCAACCCACTAA Protein sequence : MPKKRLSMRKIREVLRLKYELGHSNREISRSCGIGSSTVSDYLQRTKRADLGWPLPDDLSDSSLEQTLFPPPPPPGTSRL IPDFSEIHKELQSKRGVTLNLLWQEYKEQHPDGYQYSWFCHSYRDWAGKLDLVMRHEHRAGEKLFVDYAGQTVDVVDQHT GEITKAQVFVAVLGASNYTYAEATPSQKIEDWIGSHVRTFAFLGGVPEVVVPDNLKSGVTKACRYEPDLNPTYHDLARHY QTVVLPARVRKPRDKAKAEAGVLLVERWILAKLRKHTFFNIDDLNREIGKLLEQLNNKPFKKLSGSRKSRFEELDKPALK QLPASPYELSYWKKATVHIDYHVEVEGHYYSVPYNLVKKQIEVRYTKSTVECYFRGKRVASHIRENQRGHHTTVKEHMPV NHRKYMEWNPDRFKRWAAKVGPETLCLTETLLVKRAHPQQAYRTLLGILRLGKAYGDSRLEAACHRALHINALSYRSVES ILKSGLDQKPLPKPATEDKPVNHANIRGSQYYSPSTH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_3528 | YP_854247.1 | transposase for ISEc12 | Not tested | PAI I APEC-O1 | Protein | 3e-115 | 49 |
| unnamed | CAC39294.1 | hypothetical protein | Not tested | LPA | Protein | 3e-115 | 49 |
| ORF_6 | AAZ04417.1 | putative transposase subunit | Not tested | PAI I APEC-O1 | Protein | 2e-115 | 49 |
| VPI2_0005c | ACA01822.1 | IstA | Not tested | VPI-2 | Protein | 1e-108 | 47 |
