Gene Information

Name : UWK_02705 (UWK_02705)
Accession : YP_007468894.1
Strain : Desulfocapsa sulfexigens DSM 10523
Genome accession: NC_020304
Putative virulence/resistance : Virulence
Product : type VI secretion protein, VC_A0107 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3016452 - 3016940 bp
Length : 489 bp
Strand : -
Note : PFAM: Protein of unknown function (DUF770); TIGRFAM: type VI secretion protein, VC_A0107 family

DNA sequence : 
ATGGCAAAGGAAGGTTCTGTTGCTCCTAAGGAGAGAGTCAATATTGTCTATCGTCCGGCAACCGGAGATGCCAAGGAAGA
GGTGGAACTTCCTCTAAAAATACTCATCATGGGAGATTTCACCCAAAAAGATGATGAGCGTGCTGTTGAGGATCGAGACC
CCATCAATATCGATAAAGACAACTTCAACGATGTCATGAAAGAGCAAGACCTCAGCTTGAACATGACGGTACCAAATAAA
TTATCGGATGATCCTGACGAAGAACTTGCTGTTAAACTGGCATTTGAATCACTGAAAGATTTTTCCCCAGATGCCATAGC
CCAAAACAGTCCTGAACTAAAAAAACTCATGGAACTTCGCCAGGCCCTGACCGCGTTAAAAGGACCTCTGTCAAATGTAC
CTGAATTTCGGAAGAAAATCCAAAGCCTTGTGAAGGATGACGAGTCCAAAGATCAACTGCTGAAAGAACTCGGTGTCGAG
GATAAATAG

Protein sequence : 
MAKEGSVAPKERVNIVYRPATGDAKEEVELPLKILIMGDFTQKDDERAVEDRDPINIDKDNFNDVMKEQDLSLNMTVPNK
LSDDPDEELAVKLAFESLKDFSPDAIAQNSPELKKLMELRQALTALKGPLSNVPEFRKKIQSLVKDDESKDQLLKELGVE
DK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 1e-34 48
aec17 YP_851427.1 hypothetical protein Not tested PAI II APEC-O1 Protein 2e-33 44
aec17 AAQ96711.1 Aec17 Not tested AGI-1 Protein 1e-33 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UWK_02705 YP_007468894.1 type VI secretion protein, VC_A0107 family VFG2092 Protein 1e-45 58
UWK_02705 YP_007468894.1 type VI secretion protein, VC_A0107 family VFG2474 Protein 2e-46 56