Gene Information

Name : UWK_02704 (UWK_02704)
Accession : YP_007468893.1
Strain : Desulfocapsa sulfexigens DSM 10523
Genome accession: NC_020304
Putative virulence/resistance : Virulence
Product : type VI secretion protein, EvpB/VC_A0108 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3014955 - 3016442 bp
Length : 1488 bp
Strand : -
Note : PFAM: Protein of unknown function (DUF877); TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family

DNA sequence :
ATGGCCGAAGAACAAGAACAAAATGCTCAGGGCAGGGAGCAGATAGTAGAGGAAACGACATCCCTTCTTGAAGAGATTAC
CCAGGCAACAAAGCTTAAGCCTGCCGATGAAGCTTATGGCATGGCAAAAAAAGGTGTAGAGGCGCTTATCGCCCAGTTGA
TCGAACCCGGTAAAGGTGTTGATAAAGTCACTAAAGCCGTGGTTGATGAAATGATCGCCGAAATAGACAAGAAAGTCGGT
CTACAGGTTGATGCCATCCTCCATCATGAAGATTTTCAAAAGCTCGAATCTGCCTGGCGTTCCATGAAGTACATGGTTGA
CAATACAGATTTCCGTGAAAACATCAAACTCGAGATAGTTAATATCAGCAAAGAAGACTTGCTTGATGATTTTGAGGACT
CTCCTGAAATTGCAAAATCCGGCCTCTACAAAACAGCTTATACAGCGGAATATGGGCAATTTGGTGGCCAACCCTACGCC
GCCATGATTGGCAATTATGACTTTGGTCCAGGCCCTCAGGATATTAAGCTCCTTCAATCCATTGCAAGCGTTGCTGCAAT
GGCTCATGCCCCATTTATCGCCGCAGCTGGCCCTCAATTTTTCGATATTGAAGATTTTAATGAACTCCCCAATTTGAAAG
ATCTCAAATCGATCTTTGAGGGACCCAAATATCTCAAATGGCAGTCCTTCCGCGAATCAGAAGATGCGAGATATATCGGA
CTGACCATGCCACGTTTTCTCCTGCGCTTGCCCTATGGTGCAGAAAGTGACCCTATCAAAACCTTTGAATATGAAGAAAA
TGTTGTTGGTAATCATGGTAAATATCTCTGGGGCAACGCGGCTTTTGCCTTTGCCACAAGACTCACCGACAGTTTTGCCA
AATATCGCTGGTGTGCTAACATTATCGGCCCTCAAGGCGGTGGCACCGTCGAAGATTTAAAACTTCACCAATATAATGCC
ATGGGTGCAACCCAAACGAAAATTCCTACCGAAGTACTGGTTTCGGAACGAAAGGAATTTGAACTGGCAGAAGAAGGTTT
TATCGGCCTTACTATGAGAAAAAATAGCGATAATGCAGCCTTTTTCTCTGCTAATTCTGTTCAAAAAGCCAAAAATTTCG
GAATTTCAAAGGAAGGTAAAGAGGCAGAGCTCAACTACAAACTTGGCCTGCAGTTGCCCTATATGTTTGTGATCAACCGC
CTGGCCCATTATCTCAAGGTTTTGCAGAGAGAAAATATTGGTTCCTGGAAGGAAAGAAGCGACCTTGAAATGGAGCTGAA
TAAGTGGATCAGTCAGTATGTTACAGAAATGGACAACCCTTCGGCAAGTGCCAGAAGTCGCAGACCACTTAGAATGGCGG
AAGTAACAGTAGATTCCGTGGAAGGTGAACCTGGTTGGTACAAAGTCGGTCTGAAAGTACGCCCACATTTCAAATATATG
GGGGCATCTTTTACTTTATCACTGGTTGGGAAACTTGACAAAAAATAG

Protein sequence :
MAEEQEQNAQGREQIVEETTSLLEEITQATKLKPADEAYGMAKKGVEALIAQLIEPGKGVDKVTKAVVDEMIAEIDKKVG
LQVDAILHHEDFQKLESAWRSMKYMVDNTDFRENIKLEIVNISKEDLLDDFEDSPEIAKSGLYKTAYTAEYGQFGGQPYA
AMIGNYDFGPGPQDIKLLQSIASVAAMAHAPFIAAAGPQFFDIEDFNELPNLKDLKSIFEGPKYLKWQSFRESEDARYIG
LTMPRFLLRLPYGAESDPIKTFEYEENVVGNHGKYLWGNAAFAFATRLTDSFAKYRWCANIIGPQGGGTVEDLKLHQYNA
MGATQTKIPTEVLVSERKEFELAEEGFIGLTMRKNSDNAAFFSANSVQKAKNFGISKEGKEAELNYKLGLQLPYMFVINR
LAHYLKVLQRENIGSWKERSDLEMELNKWISQYVTEMDNPSASARSRRPLRMAEVTVDSVEGEPGWYKVGLKVRPHFKYM
GASFTLSLVGKLDKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 2e-140 56
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 2e-140 56
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 3e-135 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UWK_02704 YP_007468893.1 type VI secretion protein, EvpB/VC_A0108 family VFG2475 Protein 9e-167 68
UWK_02704 YP_007468893.1 type VI secretion protein, EvpB/VC_A0108 family VFG2093 Protein 1e-157 64
UWK_02704 YP_007468893.1 type VI secretion protein, EvpB/VC_A0108 family VFG2070 Protein 1e-83 41