Gene Information

Name : UWK_02174 (UWK_02174)
Accession : YP_007468368.1
Strain : Desulfocapsa sulfexigens DSM 10523
Genome accession: NC_020304
Putative virulence/resistance : Unknown
Product : transcriptional accessory protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2432198 - 2434324 bp
Length : 2127 bp
Strand : -
Note : PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; Helix-hairpin-helix motif; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region

DNA sequence :
ATGACCAGCAGCCAACATTACACACGTATTTCCGCAGCTCTTCAAATCTCAACGCCTCAGGTCACGGCCACCGCCGAACT
TCTTGCTGGAGGGGCAACGGTTCCTTTTATATCCAGATACCGTAAGGAAACGACTGGATTACTCGATGAAATCCAGGTCG
CAGCCATAAGAGATCTTGTGGCAAAGTTTGCTGAACTTGACAGGCGCCGTCAGGCAATTTTAGAATCTCTCAGCGAAAGA
AATCTTCTCAGCGAAAAGCTGAAGGATAGCCTGGAAAAAGCCGATAATGTAATAAGTCTTGAAGATATCTACCTGCCTTT
CAAACAGAAGAGAAAGACCCGGGCGCTCATGGCAAAAGAGCGGGGCCTGGAGCCCCTGGCCAGAGCAATTTTTACTGGCG
TTGAAAGTAATGTGGATATTTCTTCCTTTATCACCCCCGACATGGAAATATCCTCGCAGGAGGATGCATACACAGGGGCA
AGAGATATCATTGCCGAGTGGATGAGTGAAGATTTAACGACACGTTCGCATCTGCGCAAACTTTTCCGGGAAAAAGCAAT
TCTCAGTTCTACTGTGGTAAAGAAAAACCGGGAATCCGGCGCTAAATTCCGTGATTACTTTGAATGGCAGGAGGAGGCCC
GCAAGGCACCAGGCCATCGCATTCTCGCGATGTTTCGTGGTGAAAGTGAGAAGATACTACGCGTATCCCTCAAACCCTCT
GAAGAACTTGCACTCGCTCTCCTTCGCAGCCGATATTCAAAGCAGGGCAAACTCTCACAGCAGATGACACTTGCCATGGA
AGAAAGCTATAAGCGACTGCTCGGTCCAAGCCTTGAAAAGGAACTGCACAGGGAACTCAAGGAAAAAGCCGATCAGGAAG
CGATACAGGTATTTGGTGGCAACCTTCGCGAACTCCTTTTGGCCCCGGCTCTTGGGCAAAAAAGGGTCATGGCACTCGAT
CCGGGATTTCGAACCGGGGCCAAACTGGTCTGTCTCGATGAGCAGGGAAAATTGCTCCATTTTTCAGCTATATACCCAAC
CCATGGGGGGAAAAAGGAGCAGGAGGCCGGGGAAATAATACGGACCCAATGCCAGAAACAGGGAATCCAGGCCATTGCCA
TCGGGAATGGTACAGCCGGCAGAGAGACGGAACAATTTGTCCACTCTCTTCACTTGAAAGACGATATCCTGATCACGCTG
GTCAATGAAAGTGGCGCCTCTATTTATTCGGCATCGGACGTGGCCCGCAGGGAATTTCCTGATCATGACATTACTGTTCG
GGGGGCCGTTTCCATAGGCAGACGCCTTCAGGATCCTTTGGCAGAGCTTGTCAAACTCGATCCTAAATCAATAGGAGTAG
GGCAATATCAGCACGATGTAAATCAAACCGAACTGAAAAATGGTCTGGAAGATGTGGTGGTAAGCTGTGTCAACAGTGTT
GGAGTTGAGGTCAACAGTGCCTCCCGTGAACTGCTTACCTATGTTTCAGGCCTGGGCCCGGTACTTGCCGATAATATCAT
CGCCTATCGCAATGAACACGGCCCATTCCTCGACAGGAAAGACCTCAAGCATGTGCCCAGACTGGGGGCTAAGGCCTACG
AACAGTGTGCAGGTTTTTTACGTATTCACGGTGCCAAAAATCCACTTGATGACTCAGCCGTTCATCCAGAGCAGTACAAA
ACCGTTGCAAAGATTGCCTCTGACCTCAGTTGTAACATCGCTGACCTGATGAGTAGCAAGAAGCGAAGAGATTCGATCAA
CCTCAAACGTTACATTTCAGATACTCTTGGATTAGCAACCCTTCATGATATACTCGAGGAACTGGCCAAACCCGGGCGCG
ATCCACGCGAAGATTTCGTCAGCTTCGCCTTTGCAAAAAACGTCAATACAATTGATGACCTGATTGCCGAAATGAAACTG
CCGGGCATAGTGACCAACGTAACCCGTTTTGGTGCCTTCGTGGACATTGGAGTACATCAGGACGGACTCATTCATATCAG
TCAGCTGGCAGACAGATTTGTCCGTGACCCCGCTGAAGTGGTTAAAGCCGGACAGCAACTGACGGTACGGGTACTGGAGG
TTGATAAAGAGCGGCGACGCATCGCTCTTTCCCTCCGGGAGCTGTAA

Protein sequence :
MTSSQHYTRISAALQISTPQVTATAELLAGGATVPFISRYRKETTGLLDEIQVAAIRDLVAKFAELDRRRQAILESLSER
NLLSEKLKDSLEKADNVISLEDIYLPFKQKRKTRALMAKERGLEPLARAIFTGVESNVDISSFITPDMEISSQEDAYTGA
RDIIAEWMSEDLTTRSHLRKLFREKAILSSTVVKKNRESGAKFRDYFEWQEEARKAPGHRILAMFRGESEKILRVSLKPS
EELALALLRSRYSKQGKLSQQMTLAMEESYKRLLGPSLEKELHRELKEKADQEAIQVFGGNLRELLLAPALGQKRVMALD
PGFRTGAKLVCLDEQGKLLHFSAIYPTHGGKKEQEAGEIIRTQCQKQGIQAIAIGNGTAGRETEQFVHSLHLKDDILITL
VNESGASIYSASDVARREFPDHDITVRGAVSIGRRLQDPLAELVKLDPKSIGVGQYQHDVNQTELKNGLEDVVVSCVNSV
GVEVNSASRELLTYVSGLGPVLADNIIAYRNEHGPFLDRKDLKHVPRLGAKAYEQCAGFLRIHGAKNPLDDSAVHPEQYK
TVAKIASDLSCNIADLMSSKKRRDSINLKRYISDTLGLATLHDILEELAKPGRDPREDFVSFAFAKNVNTIDDLIAEMKL
PGIVTNVTRFGAFVDIGVHQDGLIHISQLADRFVRDPAEVVKAGQQLTVRVLEVDKERRRIALSLREL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 9e-125 45