Gene Information

Name : UWK_02171 (UWK_02171)
Accession : YP_007468365.1
Strain : Desulfocapsa sulfexigens DSM 10523
Genome accession: NC_020304
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2428847 - 2429563 bp
Length : 717 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence :
ATGACGTCAGACCAGAAACAGATACCAACAGATACCAGGAAAGCTGAGGCAGTTCTCAAGGATATCTGGAAAACCTATAC
CATGGGGGCAGAAAAGGTCCATGCTCTGGCCGGGGTTTCTCTCGTTTTTGAACGTGGCTCCTTCTGGGCCATTCTCGGCA
CCAGTGGCTCTGGAAAAAGCACCCTGCTCAACCTCCTTGGCTGTCTGGACCGGCCCACATCGGGACGATATCTTTTACGG
GGGAATGATATAAGCCTTATGGACGATGATGCCCTCAGTGAAATACGACTGCGCAATATCGGATTTATATTCCAGAGTTT
TAATCTTATCCAGCAATCCACCGTCGAAGAAAATATAGAACTGCCCCTCTATTATCAGGGAATCGATGCTGCAGAGAGCA
GGAATCGCGCCAGAAAGCTTGCTGCCATGGTGGGGCTTGAAAAGCGTCTCAACCATCGTCCCATGGAACTCTCGGGAGGA
CAGCAGCAGCGAGTTGCCATAGCCAGATCCCTGGCCAATGATCCGGGATTACTCCTTGCCGATGAGCCAACCGGGAACCT
GGATTCACAAACCAGCGCTGAAATCATGAGGCTGCTCTGCAAACTCAATGATCAGGGGAAAACCATAATTATGGTAACCC
ATGAACCCGACATTGCTGCCTTTGCCCACAAACGGCTTTATATGAAAGATGGCGCTATAGAGCGCCTTGAGGGATAG

Protein sequence :
MTSDQKQIPTDTRKAEAVLKDIWKTYTMGAEKVHALAGVSLVFERGSFWAILGTSGSGKSTLLNLLGCLDRPTSGRYLLR
GNDISLMDDDALSEIRLRNIGFIFQSFNLIQQSTVEENIELPLYYQGIDAAESRNRARKLAAMVGLEKRLNHRPMELSGG
QQQRVAIARSLANDPGLLLADEPTGNLDSQTSAEIMRLLCKLNDQGKTIIMVTHEPDIAAFAHKRLYMKDGAIERLEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-29 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 43
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 2e-27 41
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-26 41
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-23 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UWK_02171 YP_007468365.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 6e-43 51
UWK_02171 YP_007468365.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 3e-49 49
UWK_02171 YP_007468365.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 6e-38 48
UWK_02171 YP_007468365.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 2e-39 47