Gene Information

Name : UWK_01389 (UWK_01389)
Accession : YP_007467602.1
Strain : Desulfocapsa sulfexigens DSM 10523
Genome accession: NC_020304
Putative virulence/resistance : Resistance
Product : CheY-like receiver and winged-helix DNA-binding domain-containing response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1572021 - 1572701 bp
Length : 681 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGAGAATTCTCATTGTTGACGACGAAGAGAACCTGGTTGAACAGATCCGGCTCGCCCTGACCCAGCAGAAATACACCGT
TGATACGGCATTTGACGGAGAGGAGGCCCTGGAAAAAATATATGTTGAGCCCTATGACCTTATCTTACTGGATATAATGC
TCCCCAAAAGGGACGGCTTTGGAGTACTCTTCGAGCTCCGTGACGAAAAGAACTCCACTCCGGTCCTGATGTTGACGGCC
AAAGGAGCGATCGAGGATAAGATCAAAGGGTTGGATATGGGGGCGGATGACTACCTGGCCAAGCCCTTTTCCATGGAAGA
ACTCCTGGCAAGGATGCGTGCTCTGTTACGACGCAGCAACGAGCTTGTCTCACCAGTCCTGGAGGTTAATACTATCACCC
TGGACCCTGCTAAAAGAGAGGTCCATAAGGACGGGCAACTGATTGAACTGACGCTAAAAGAATTCTCAATTCTTGAGTTC
TTGATGTACAATATAAACAGGGCGATATCACGCGTAAGCATCGCTGAACATGTCTGGGGAGATGAATTTGATCCCTGGAC
CATGTCCAATTCTATAGATGTACATATCAAAAATCTACGAAAAAAAATTGATGATTCTAAGGGGCAGATTATTCGTACCG
TTCGGGGTGTTGGCTATATAATCAAGGATGACGACAAGTGA

Protein sequence :
MRILIVDDEENLVEQIRLALTQQKYTVDTAFDGEEALEKIYVEPYDLILLDIMLPKRDGFGVLFELRDEKNSTPVLMLTA
KGAIEDKIKGLDMGADDYLAKPFSMEELLARMRALLRRSNELVSPVLEVNTITLDPAKREVHKDGQLIELTLKEFSILEF
LMYNINRAISRVSIAEHVWGDEFDPWTMSNSIDVHIKNLRKKIDDSKGQIIRTVRGVGYIIKDDDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 7e-33 44
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 5e-30 42
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 7e-30 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator NC_003923.1003749.p0 Protein 5e-33 46
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator NC_002758.1121390.p0 Protein 4e-30 45
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator NC_010079.5776364.p0 Protein 4e-30 45
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator NC_002952.2859858.p0 Protein 4e-30 45
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator NC_007622.3794948.p0 Protein 4e-30 45
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator NC_003923.1003417.p0 Protein 4e-30 45
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator NC_013450.8614146.p0 Protein 4e-30 45
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator NC_002951.3238224.p0 Protein 4e-30 45
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator NC_007793.3914065.p0 Protein 4e-30 45
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator AE015929.1.gene1106. Protein 5e-26 45
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator NC_002952.2859905.p0 Protein 8e-33 45
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator NC_007793.3914279.p0 Protein 6e-33 45
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator NC_002745.1124361.p0 Protein 6e-33 45
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator NC_009782.5559369.p0 Protein 6e-33 45
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator NC_002951.3237708.p0 Protein 6e-33 45
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator NC_007622.3794472.p0 Protein 8e-33 45
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator NC_002758.1121668.p0 Protein 6e-33 45
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator NC_009641.5332272.p0 Protein 6e-33 45
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator NC_013450.8614421.p0 Protein 6e-33 45
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator BAC0347 Protein 1e-28 44
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator BAC0197 Protein 6e-33 44
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator BAC0111 Protein 3e-31 43
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator AF310956.2.orf0.gene Protein 2e-30 42
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator U35369.1.gene1.p01 Protein 3e-30 42
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator AE016830.1.gene2255. Protein 3e-30 42
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator BAC0125 Protein 4e-31 42
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator CP000675.2.gene1535. Protein 4e-30 42
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator BAC0308 Protein 1e-30 42
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator AF155139.2.orf0.gene Protein 1e-26 42
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator BAC0487 Protein 3e-26 41
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator CP001485.1.gene721.p Protein 9e-26 41
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator BAC0083 Protein 1e-32 41
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator BAC0288 Protein 3e-26 41
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator BAC0638 Protein 5e-26 41
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator U82965.2.orf14.gene. Protein 4e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator VFG0596 Protein 3e-33 44
UWK_01389 YP_007467602.1 CheY-like receiver and winged-helix DNA-binding domain-containing response regulator VFG1390 Protein 4e-33 42