Gene Information

Name : UWK_01171 (UWK_01171)
Accession : YP_007467392.1
Strain : Desulfocapsa sulfexigens DSM 10523
Genome accession: NC_020304
Putative virulence/resistance : Virulence
Product : CheY-like receiver and winged-helix DNA-binding domain-containing response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1313726 - 1314400 bp
Length : 675 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :

ATGCGCCTCCTAGTAGTTGAAGATGACAAAAAAATAGCATCCTTCCTTCAGAAAGGGCTTCAGGAGGCAGGCTTCAGTGT
GGATATATGCCATACCGGAACAGATGGCCTCTCGCTCGCCCTGACAGAGCCTTATGGAGCGGCAGTCATCGATATCATGC
TGCCAGGCCTTGACGGACTCAGCCTTATTGAAGAACTAAGAAATAAGGGAATTGAAACACCGGTTCTTATCCTCAGCGCC
AGACAATCTGTGGATGACCGCATTGAAGGGCTGCAGCGTGGAGGGGATGACTATATGATCAAACCCTTTTCCTTTAACGA
GTTACTTGCCCGTATCCATGCATTGCTGCGTAGAGGCCAGAAAAATGTTGAATCTGGTATAATTACCGTTGGAGAGCTGC
AACTCGACCCTCTTAAACGTGAAGTCAAACGCAAAAACACTAAAATCGAACTCCCTGCTAAAGAATATGCACTACTTGAG
CTGATGATGCGCAATCCAGGGCGTGTTCTATCTAAAACTTCTATCCTTGAACATATTTACGACTATAGTTTCGATCCTCA
AACCAATGTTATTGATGTCCTTGTCTGTCGCCTGCGTAACAGCATAGACAAAAATCACACAAAAAAATGCATACATACAG
TACGAGGTATGGGCTATGTCCTTCGTGACGAGTAG

Protein sequence :

MRLLVVEDDKKIASFLQKGLQEAGFSVDICHTGTDGLSLALTEPYGAAVIDIMLPGLDGLSLIEELRNKGIETPVLILSA
RQSVDDRIEGLQRGGDDYMIKPFSFNELLARIHALLRRGQKNVESGIITVGELQLDPLKREVKRKNTKIELPAKEYALLE
LMMRNPGRVLSKTSILEHIYDYSFDPQTNVIDVLVCRLRNSIDKNHTKKCIHTVRGMGYVLRDE

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
copR	NP_460069.2	transcriptional regulatory protein YedW	Not tested	SPI-5	Protein	1e-43	44
copR	AAC33719.1	regulatory protein CopR	Not tested	SPI-5	Protein	1e-42	43

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
UWK_01171	YP_007467392.1	CheY-like receiver and winged-helix DNA-binding domain-containing response regulator	BAC0083	Protein	5e-54	51
UWK_01171	YP_007467392.1	CheY-like receiver and winged-helix DNA-binding domain-containing response regulator	BAC0638	Protein	1e-48	51
UWK_01171	YP_007467392.1	CheY-like receiver and winged-helix DNA-binding domain-containing response regulator	BAC0125	Protein	5e-51	50
UWK_01171	YP_007467392.1	CheY-like receiver and winged-helix DNA-binding domain-containing response regulator	BAC0197	Protein	3e-50	48
UWK_01171	YP_007467392.1	CheY-like receiver and winged-helix DNA-binding domain-containing response regulator	BAC0308	Protein	6e-49	46
UWK_01171	YP_007467392.1	CheY-like receiver and winged-helix DNA-binding domain-containing response regulator	BAC0111	Protein	5e-51	45
UWK_01171	YP_007467392.1	CheY-like receiver and winged-helix DNA-binding domain-containing response regulator	BAC0347	Protein	3e-46	43
UWK_01171	YP_007467392.1	CheY-like receiver and winged-helix DNA-binding domain-containing response regulator	NC_002516.2.879194.p	Protein	2e-33	42

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
UWK_01171	YP_007467392.1	CheY-like receiver and winged-helix DNA-binding domain-containing response regulator	VFG0596	Protein	4e-44	44
UWK_01171	YP_007467392.1	CheY-like receiver and winged-helix DNA-binding domain-containing response regulator	VFG1390	Protein	4e-47	43
UWK_01171	YP_007467392.1	CheY-like receiver and winged-helix DNA-binding domain-containing response regulator	VFG1389	Protein	9e-38	41