Gene Information

Name : smpB (A605_03955)
Accession : YP_007464164.1
Strain : Corynebacterium halotolerans YIM 70093
Genome accession: NC_020302
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 843759 - 844247 bp
Length : 489 bp
Strand : +
Note : COG0691 tmRNA-binding protein

DNA sequence :
ATGGCCAAGAAGAACAAGAAGCCGGGCAGCAACGTCATCGCGACGAATCGCAGGGCCCGCCACGACTACAAGATCCTGGA
GACCCACGAGTGCGGCATCGTCCTCGTCGGCACGGAGATCAAGTCGCTGCGTGAGGGCAAGGCCTCGCTGGTCGACGCCT
TCGCCACCATCGATGAGGGCGAGGTGTGGCTGCGCAACCTCCACATCCCCGAGTACTCGCACGGCTCCTGGACCAACCAC
GCCCCACGGCGCGTGCGCAAGCTGCTGCTGCACCGCCGGGAGATTGACTCCCTGCTGGGCAAGGTCCGCGACGGCCGCAG
GACACTCGTGCCGCTGTCGCTGTACCTCAAGGACGGCAAGCTCAAGGTGGAGCTCGGCCTCGCCGAGGGCAAGCAGGACT
ACGACAAGCGCCAGGACATCAAGCGGCGCACCGAGGAACGTGAGGTTGTCCGTGAGCTGGGCCGCCGCGTGAAGGGGGTC
AAGGGATGA

Protein sequence :
MAKKNKKPGSNVIATNRRARHDYKILETHECGIVLVGTEIKSLREGKASLVDAFATIDEGEVWLRNLHIPEYSHGSWTNH
APRRVRKLLLHRREIDSLLGKVRDGRRTLVPLSLYLKDGKLKVELGLAEGKQDYDKRQDIKRRTEEREVVRELGRRVKGV
KG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 5e-47 80
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 8e-28 55
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 4e-20 43