Gene Information

Name : A605_03140 (A605_03140)
Accession : YP_007464003.1
Strain : Corynebacterium halotolerans YIM 70093
Genome accession: NC_020302
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 668081 - 668899 bp
Length : 819 bp
Strand : -
Note : COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components

DNA sequence :
GTGACCTCCTCCCACACGTTGACGGCCCGGGACATCCACCTGGCCTACGGTGACCGCCGCGTCATCGAGGACCTGAGCGT
CGAGCTGGTCCCCGGCGCCGTCACCTCCATCGTCGGCCCCAACGGCTGCGGCAAATCCACGTTGCTGCGTGCCCTGTCGC
GCCTGCTCAAACCCTCCGGCGGGCAGGTGCTTCTCGACGGCCGCGCACTGGCGGAGTATCCGACGAAGAAACTGGCCCGC
ACCCTCGGGCTGCTGCCCCAGACACCGGTCGCCCCGGACGGCATCGTCGTCGCGGATCTGGTCGGCCGCGGGCGCACCCC
GCACCAGGGGCTGCTGGGCCGCTGGTCCACCCGGGACCACGAGATCGTCGCCGAGGCGCTGGCCGCCACCGGCACCACGG
AGCTGGCCGAGCGCAGCGTCGACGAGTTGTCCGGCGGGCAGCGCCAGCGCGTGTGGATCGCGATGGCACTGGCCCAGGAC
ACCGACATCCTGCTGCTGGACGAGCCGACGACCTACCTGGACGTGGCCCACCAGCTCGAGGTCCTCGACCTGCTCACCGA
CCTCAACGCCTCCCGCGGCACCACCGTCGTGATGGTGCTGCACGACCTCAACCTGGCCGCCCGCTACTCGGACCAGCTGG
TGGCCATGCACGCCGGGACGGTCCACACCGTGGGCACCCCGGAGCAGGTGGTCACCGAGGCGACGATGAAGGAGGTCTTC
GACATCGACTCCCGGGTACTGCCCGACCCGGTCTCCGGCCGGCCGATGGTCATGCCGATCGGCCGCCACCACGCCCCCGC
CCACCGGAACACGAGGTAA

Protein sequence :
MTSSHTLTARDIHLAYGDRRVIEDLSVELVPGAVTSIVGPNGCGKSTLLRALSRLLKPSGGQVLLDGRALAEYPTKKLAR
TLGLLPQTPVAPDGIVVADLVGRGRTPHQGLLGRWSTRDHEIVAEALAATGTTELAERSVDELSGGQRQRVWIAMALAQD
TDILLLDEPTTYLDVAHQLEVLDLLTDLNASRGTTVVMVLHDLNLAARYSDQLVAMHAGTVHTVGTPEQVVTEATMKEVF
DIDSRVLPDPVSGRPMVMPIGRHHAPAHRNTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 5e-64 55
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-54 49
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-62 47
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-62 47
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-52 45
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-52 45
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-52 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-52 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-50 44
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-51 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-51 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-51 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-51 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A605_03140 YP_007464003.1 hypothetical protein BAC0164 Protein 7e-55 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A605_03140 YP_007464003.1 hypothetical protein VFG1042 Protein 6e-55 49
A605_03140 YP_007464003.1 hypothetical protein VFG0925 Protein 8e-63 49