Gene Information

Name : A605_12625 (A605_12625)
Accession : YP_007465883.1
Strain : Corynebacterium halotolerans YIM 70093
Genome accession: NC_020302
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone protein ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2789493 - 2792054 bp
Length : 2562 bp
Strand : -
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
TTGAGCTCGTTCAACCCCACCACCAAGACTCAGGAGGCCCTGCAGGACGCCCTGCAGCAGGCCTCGAGCAACGGCAACCC
GGACATCCGTCCGGCGCATCTTCTCGCCGCCATCCTCGACCAGACCGACGGCATCGCCGCCCCGGTACTCAAGGCCACCG
GCGTCGACCCGGAGACGGTCCTCAAGGAGGCCCGGGAACTGGTCGACTCCTACCCCAGGGCCGAGGGTGCCAACCTGGCG
AACCCGAACTTCAACCGCGACGCCCTCAATGCGCTGACCGCCGCCCAGGAACTGGCCGGCGAGCTCGGCGACGAGTACGT
CTCCACCGAGGTGCTGCTGGCCGGCATCGCCCGCGGCTCCTCCGATGCCGCTGATCTGCTGAAGAAGCGCGGCGCCACCT
ACGACGCCATCAAGGGCACCTTCCCGTCGGTGCGGGGCTCCGCCAAGGTGACCAGCCAGGATCCGGAGGGCCAGTTCCAG
GCCCTGGAGAAGTACTCCACCGACCTGACCGCCCGGGCCCGCGAGGGCAAGATCGACCCGGTCATCGGCCGCGACGCCGA
GATCCGCCGGGTGGTCCAGGTGCTGTCCCGCCGCACCAAGAACAACCCGGTGCTCATCGGTGAGCCGGGCGTGGGCAAGA
CCGCCATCGTGGAGGGCCTGGCCCGGCGCATCGTCGCCGGGGACGTGCCGGAGTCGCTGCGCGGCAAGACCCTGATCTCC
CTGGATCTGGGGTCGATGGTCGCCGGCGCGAAGTACCGCGGTGAGTTCGAGGAGCGGCTGAAGGCCGTCCTCGACGAGAT
CAAGAACTCCAACGGTCAGATCGTCACCTTCATCGACGAGCTGCACACCGTCGTCGGCGCCGGCGCGACGGGCGAGTCCG
CCATGGACGCCGGCAACATGATCAAGCCGCTGCTCGCCCGGGGTGAGCTGCGCCTGGTCGGTGCGACCACGCTCAACGAG
TACCGCAAGTACATCGAGAAGGACGCCGCCCTGGAGCGCCGCTTCCAGCAGGTCTACGTCGGTGAGCCGTCGGTCGAGGA
CACCGTCGGCATCCTGCGCGGCCTGAAGGAGCGCTACGAGGTCCACCACGGTGTGCGGATCCAGGACTCCGCCCTGGTCG
CCGCGTCCACGCTCTCGGACCGCTACATCACCAGCCGCTTCCTGCCGGACAAGGCCATCGACCTGGTCGACGAGGCCGCC
TCCCGCCTGCGCATGGAGATCGACTCCTCTCCGGAGGAGATTGACGAGCTTGAGCGCATCGTCCGCCGCCTCGAGATCGA
GGAGGTCGCCCTGCAGAACGAGACCGACGTGGCCTCGCGGGAGCGGCTGGAGAAGCTGCGCCAGGAACTGGCCGACGAGC
GAGAGAGGCTCGGTGAGCTCAAGGCCCGCTGGACCAACGAGAAGTCCGCGATCGACAGGGTGCGCGAGGCCAAGGAACAG
CTGGAGAAGCTGCGCTCCGAGTCGGAGATCGCCGAGCGTGACGGCGACTACGGCAAGGTCGCCGAGCTGCGTTACGGTCG
CATCCCCGAGCTGGAGAAGCAGGTCGAGGAGGCCGAGGTTGAGGTGCAGGACGGCGGCAACAACGCCATGCTGACCGAGG
AGGTCACCCCGGACACCATCGCCGAGGTCGTCTCCGCGTGGACCGGCATCCCGGCCGGCAAGATGCTCGCCGGCGAAACC
GAGAAGCTCCTGGCCATGGAGCGGGTCATCGCCAAGCGTGTCGTCGGCCAGCACGAGGCCGTCCAGGCCGTCTCCGACGC
CGTCCGCCGCTCCCGGGCCGGCGTGGCCGACCCGGATCGCCCGACTGGTTCCTTCCTCTTCCTGGGGCCGACGGGCGTCG
GCAAGACCGAGCTGGCCAAGGCCGTCGCGGACTTCCTCTTCGACGACGAGCGCGCCATGGTCCGCGTCGACATGTCCGAG
TACGGCGAGAAACACTCCGTCGCCCGTCTCGTCGGTGCCCCTCCGGGGTACGTCGGCTACGACACCGGCGGTCAGCTGAC
CGAGGCCGTGCGCCGCCGCCCGTACACCCTGGTGCTCTTCGACGAGGTCGAGAAGGCCCACCCGGACGTCTTCGACGTGC
TGCTGCAGGTCCTCGACGAGGGCCGGCTGACCGACGGTCAGGGCCGTACCGTGGACTTCCGCAACACGGTGATCATCCTG
ACCTCGAACCTCGGCGCCGGCGGCACCCGTGAGCAGATCATGGACGCCGTCAAGCACGCCTTCAAGCCGGAGTTCATCAA
CCGGCTCGACGACGTCGTGGTCTTCGACCCGCTGTCCGAGGACCAGCTGACCAGCATCGTCGACATCCAGATCGGCCAGC
TGGCCAAGCGGCTGTCCGCCCGCCGACTCACGCTCCAGGTCTCGGACGCCGCGAAGCTGTGGCTGGCCGAGCGCGGCTAC
GATCCGGCGTACGGTGCCCGCCCGCTGCGCCGCCTGATCCAGCAGGCCATCGGCGACCGCCTGGCCAAGGAACTGTTGGC
CGGTGACGTGCGCGACGGTGACACCGTCCATGTCGACGTCGCCGACGGCGGCCAGAGCCTCGACGTCTCGGCGCCGAGGT
AG

Protein sequence :
MSSFNPTTKTQEALQDALQQASSNGNPDIRPAHLLAAILDQTDGIAAPVLKATGVDPETVLKEARELVDSYPRAEGANLA
NPNFNRDALNALTAAQELAGELGDEYVSTEVLLAGIARGSSDAADLLKKRGATYDAIKGTFPSVRGSAKVTSQDPEGQFQ
ALEKYSTDLTARAREGKIDPVIGRDAEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLRGKTLIS
LDLGSMVAGAKYRGEFEERLKAVLDEIKNSNGQIVTFIDELHTVVGAGATGESAMDAGNMIKPLLARGELRLVGATTLNE
YRKYIEKDAALERRFQQVYVGEPSVEDTVGILRGLKERYEVHHGVRIQDSALVAASTLSDRYITSRFLPDKAIDLVDEAA
SRLRMEIDSSPEEIDELERIVRRLEIEEVALQNETDVASRERLEKLRQELADERERLGELKARWTNEKSAIDRVREAKEQ
LEKLRSESEIAERDGDYGKVAELRYGRIPELEKQVEEAEVEVQDGGNNAMLTEEVTPDTIAEVVSAWTGIPAGKMLAGET
EKLLAMERVIAKRVVGQHEAVQAVSDAVRRSRAGVADPDRPTGSFLFLGPTGVGKTELAKAVADFLFDDERAMVRVDMSE
YGEKHSVARLVGAPPGYVGYDTGGQLTEAVRRRPYTLVLFDEVEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTVIIL
TSNLGAGGTREQIMDAVKHAFKPEFINRLDDVVVFDPLSEDQLTSIVDIQIGQLAKRLSARRLTLQVSDAAKLWLAERGY
DPAYGARPLRRLIQQAIGDRLAKELLAGDVRDGDTVHVDVADGGQSLDVSAPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-99 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A605_12625 YP_007465883.1 ATP-dependent chaperone protein ClpB VFG2076 Protein 4e-113 41