Gene Information

Name : A605_11730 (A605_11730)
Accession : YP_007465706.1
Strain : Corynebacterium halotolerans YIM 70093
Genome accession: NC_020302
Putative virulence/resistance : Resistance
Product : ABC-type transport system, involved in lipoprotein release, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2581195 - 2582016 bp
Length : 822 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence :

ATGTCAGACCGCGAGACCACCCCGTCCGCCGGACGATCCGGCGATCAGGACCCGCAGGAGGCGACCACCGGCGTCCAGGG
CGTCGGGGCCGGGACCCCCGGTGCCGCGGCCCGCGCCGTCGGGCTGTTCAAGCAGTACGGGCAGGGCGATACCGCAGTCA
CGGCCCTCGACCACGTCGATGTGGAGTTCGTCCGCAACCAGTTCACCGCCATCATGGGCCCGTCGGGTTCCGGCAAGTCC
ACCCTGATGCACTGCATGGCGGGTCTGGATTCGGCGACCGGGGGATCCGCGTTCATCGGTGACACCGATCTGTCCACGCT
GCGGGACAAGGAGATGACGGCTCTGCGGCGCGACCGGCTCGGCTTCATCTTCCAGTCCTTCAACCTGGTGCCCACCCTGA
CGGCCGCGGAGAACATCACGCTGCCCTCCGACATCGCAGGCCGAAAGGTCGACCAGGACTGGTTCGGGGAGATCACCTCC
CGGCTTGGGCTCTCTCAGCGGTTGACCCACCGTCCCGCGGAGCTCTCGGGTGGTCAGCAGCAGCGTGTGGCGTGCGCCCG
CGCGCTCGTCTCCCGCCCGGAGATCATCTTCGGTGACGAGCCCACCGGCAACCTGGACTCCAAGTCCTCGGCCGAGGTGC
TGTCGATCCTGCGCACCGCCGTCGACCAGGACAACCAGACCGTGGTCATCGTCACCCACGACGCGACAGCCGCCGCCTAC
GCTGACCGCGTCATCTTTCTCGCGGACGGCCGGATCGTCAACGAGCTGCACGCGCCGACGATGGACACGATCCTGGCCAC
CCTGACCGGTATCGAGGACTAG

Protein sequence :

MSDRETTPSAGRSGDQDPQEATTGVQGVGAGTPGAAARAVGLFKQYGQGDTAVTALDHVDVEFVRNQFTAIMGPSGSGKS
TLMHCMAGLDSATGGSAFIGDTDLSTLRDKEMTALRRDRLGFIFQSFNLVPTLTAAENITLPSDIAGRKVDQDWFGEITS
RLGLSQRLTHRPAELSGGQQQRVACARALVSRPEIIFGDEPTGNLDSKSSAEVLSILRTAVDQDNQTVVIVTHDATAAAY
ADRVIFLADGRIVNELHAPTMDTILATLTGIED

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
Cp1002_1464	YP_005681730.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	5e-36	43
CpC231_1466	YP_005683828.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	3e-39	42
cpfrc_01473	YP_003783873.1	hypothetical protein	Not tested	PiCp 5	Protein	3e-39	42
CpI19_1473	YP_005685914.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	3e-39	42

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
A605_11730	YP_007465706.1	ABC-type transport system, involved in lipoprotein release, ATPase component	CP001581.1.gene598.p	Protein	2e-47	47
A605_11730	YP_007465706.1	ABC-type transport system, involved in lipoprotein release, ATPase component	CP001581.1.gene798.p	Protein	7e-42	45
A605_11730	YP_007465706.1	ABC-type transport system, involved in lipoprotein release, ATPase component	NC_008702.1.4606598.	Protein	1e-33	43