Gene Information

Name : A605_10790 (A605_10790)
Accession : YP_007465520.1
Strain : Corynebacterium halotolerans YIM 70093
Genome accession: NC_020302
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2377326 - 2378147 bp
Length : 822 bp
Strand : -
Note : COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components

DNA sequence : 
GTGATCCGCCCGCAGCAGTATCCCGCCGGCCGCTCGGATGAGGGCCTGTCCGTCCGGGGCGTCAGCCTCGGCTACGGCGG
GGGGACGATCGTCGACCACGTGGACCTCGACGTCGAACCCGGCTCCTTCACCAGCATCATCGGTCCCAACGGCTGCGGGA
AATCCACCCTGCTCAAGGGCATGAGCAGATTGCTCACCCCCACCACCGGACAGGTGCTGCTCGACGGCTCGCCCCTGCAG
AGCTGGAAACCGAAGGCCGCCGCCCGCCGGGTGGGCCTGCTGCCGCAGACCTCCAACGCACCGGACGGCTCGACGGTTTA
CGGGCTGGTCCGGCGCGGACGGTTCCCGCACCAGGGCTTCCTAGCACCGTGGAACGACGCCGACGAACGGGCCGTCACCG
CCGCCATGGCCCGCACCGGCGTCACCGAGCTGCGCGACGCCCAAGTCGGGGAGCTCTCCGGCGGCCAGCGTCAGCGCGTG
TGGGTGGCGATGACCCTGGCACAGGAGTCCGGGATCCTGCTGCTCGACGAGCCGACCACCTTCCTCGACATCGCCTACCA
GCTGGAGCTTCTCGACCTGTTCGCCGAACTCCACCGCGAGGGCCGCACGATCGTCGCCGTGCTGCACGACCTCAACCTGG
CGGCCCGCTACTCCACCCGGATCGCCGCTATGCGCACCGGCCGGATGCTGGCCTACGGCACCCCCGGGGACGTGATCACG
GAGGAGACCATGGCCGCCGTGTACGGGGTGTCCTGTTCCGTGATCCCCGATCCGCACACCGGCGGCCCCCTGGTCGTCCC
CGTCTCCCGGAGCCCACAGTGA

Protein sequence : 
MIRPQQYPAGRSDEGLSVRGVSLGYGGGTIVDHVDLDVEPGSFTSIIGPNGCGKSTLLKGMSRLLTPTTGQVLLDGSPLQ
SWKPKAAARRVGLLPQTSNAPDGSTVYGLVRRGRFPHQGFLAPWNDADERAVTAAMARTGVTELRDAQVGELSGGQRQRV
WVAMTLAQESGILLLDEPTTFLDIAYQLELLDLFAELHREGRTIVAVLHDLNLAARYSTRIAAMRTGRMLAYGTPGDVIT
EETMAAVYGVSCSVIPDPHTGGPLVVPVSRSPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-59 50
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 9e-55 47
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 9e-55 47
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 9e-55 47
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 9e-55 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-49 46
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-47 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-49 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-49 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-49 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-49 42
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-55 42
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-55 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A605_10790 YP_007465520.1 ABC transporter BAC0164 Protein 1e-47 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A605_10790 YP_007465520.1 ABC transporter VFG0925 Protein 5e-66 53
A605_10790 YP_007465520.1 ABC transporter VFG1042 Protein 9e-48 43