Gene Information

Name : tpx (A605_08025)
Accession : YP_007464969.1
Strain : Corynebacterium halotolerans YIM 70093
Genome accession: NC_020302
Putative virulence/resistance : Virulence
Product : lipid hydroperoxide peroxidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1746263 - 1746760 bp
Length : 498 bp
Strand : -
Note : COG2077 Peroxiredoxin

DNA sequence :
ATGGCTACCGTTAACTTCCAGAACACCGCAACGTCCACCGTCGGCGAGCTGCCGAACGTGGGCGACCAGCTCCCGTCCTT
CACCCTCGTCGGCACGGACCTCGGGGAATTCACCAACGAGGAGTTCGCCGGCAAGCGTGTCATCCTCAACGTCTTCCCCT
CCCTCGACACCGGCGTGTGCGCGGCGTCCGTGCGCCGCTTCAACGAACTGGCCTCCGAACTCGACAACACCGTCGTGGTC
GGTGTGTCCAAGGACCTGCCGATGGCCCAGGGCCGTTTCTGCGAGGCCGAGGGCATCGAGAACGTCACCGCCGGTTCCGC
TTTCCGTACCTCCTTCGGTGAGGACTACGGCCTGACCCTCGAGGGCTCCCCGCTGCAGGGTCTGCTCGCCCGCGCGGTCG
TCGTCGCCGATGAGAACGGCAAGGTCGTCTACACCCAGCTCGTCGACGAGATCACCACCGAGCCGGACTACGACTCCGCC
CTTGAGGCGCTGAAGTAG

Protein sequence :
MATVNFQNTATSTVGELPNVGDQLPSFTLVGTDLGEFTNEEFAGKRVILNVFPSLDTGVCAASVRRFNELASELDNTVVV
GVSKDLPMAQGRFCEAEGIENVTAGSAFRTSFGEDYGLTLEGSPLQGLLARAVVVADENGKVVYTQLVDEITTEPDYDSA
LEALK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 1e-35 49
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 6e-36 49
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 9e-36 49
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 4e-36 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_007464969.1 lipid hydroperoxide peroxidase VFG0087 Protein 2e-36 49