Gene Information

Name : yfeD (BVwin_00810)
Accession : YP_007462027.1
Strain : Bartonella vinsonii Winnie
Genome accession: NC_020301
Putative virulence/resistance : Virulence
Product : Iron transport system membrane protein YfeD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 99981 - 100886 bp
Length : 906 bp
Strand : +
Note : -

DNA sequence : 
ATGATTGATCAATTACTACTTCCTTTTCAATTTTCTTTTATGCTTAAGGGCATGATTATTGTCACGATTCTTTCTATTCC
TATGGCAATGCTATCTTGTTTTCTTATTTTAAAAGGGTGGGCTCTTTTGGGAGATGCAATTTCGCATGCCGTTTTTCCAG
GTGTTGTGATTGGTTATATGACAACGCCGTGGGTGATAGCATTTTTTTCTTCTTTGCCATTTCCTTGGTTTCAGCATGTA
CGTCCAGAGAATGTTACAATGACTTTGATTACGTGCGGTGCTTTTGTCGCGGGTATGATTTGCTCTATTTTGACGGGTTT
TTTAGGGAGCAATAGTCGCATCAAACAGGATACGGTGATGGGTGTTGTTTTTTCCTCGATGTTTGGTTTGGGGCTTGTCT
TAGCAACGGCTATTTATAGCAGCTTAGATTTGAATCATATTCTATTTGGTAATCTCTTGGGTGTTAACTGGCTTGATATT
ACACAGACAGCGATAATTTCTACTATTGTCACCTTCATTCTAGGAGCAAAATGGCGCGATTTTATGCTGTATATTTTTGA
TTCAGTTCAAGGTCGTGCAATGGGGTTGCGGATATCGGTACTCCATTATACTCTTTTAACAATGATTTCTCTCACCATTG
TTGCGGCTTTGAAAGCTGTTGGTATTGTTCTCGTTATTTCTTTATTGATAGCACCAGGAGCAATTGCCTATCTTATCACG
AAGCGATTTTCTTTTATGTTGGTGATTGCTATACTTGTTGCAGCTTTTTCTGGTTTTTTAGGAATTTATCTAAGCTTATT
TATCGGCTCTGATTCTGCTTCCACAATTGTGTTGATTTTAACACTCATTTTTATCGCTATTTTTATGTCACTTTTCTTTC
GTAAAAGTGCGATTCGGGAAATTTAA

Protein sequence : 
MIDQLLLPFQFSFMLKGMIIVTILSIPMAMLSCFLILKGWALLGDAISHAVFPGVVIGYMTTPWVIAFFSSLPFPWFQHV
RPENVTMTLITCGAFVAGMICSILTGFLGSNSRIKQDTVMGVVFSSMFGLGLVLATAIYSSLDLNHILFGNLLGVNWLDI
TQTAIISTIVTFILGAKWRDFMLYIFDSVQGRAMGLRISVLHYTLLTMISLTIVAALKAVGIVLVISLLIAPGAIAYLIT
KRFSFMLVIAILVAAFSGFLGIYLSLFIGSDSASTIVLILTLIFIAIFMSLFFRKSAIREI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD NP_461785.1 permease Virulence SPI-1 Protein 1e-61 50
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-62 50
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 4e-62 50
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 4e-62 50
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 7e-62 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeD YP_007462027.1 Iron transport system membrane protein YfeD BAC0352 Protein 5e-62 50
yfeD YP_007462027.1 Iron transport system membrane protein YfeD BAC0442 Protein 2e-52 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfeD YP_007462027.1 Iron transport system membrane protein YfeD VFG0528 Protein 4e-62 50