|
Name : CONE_0303 (CONE_0303) Accession : YP_007460071.1 Strain : Candidatus Kinetoplastibacterium oncopeltii TCC290E Genome accession: NC_020299 Putative virulence/resistance : Virulence Product : arginine decarboxylase Function : - COG functional category : - COG ID : - EC number : 4.1.1.19 Position : 97684 - 99945 bp Length : 2262 bp Strand : + Note : Amino acid transport and metabolism; SecretomeP prediction: 0.08. DNA sequence : ATGAGATTTTTATTTCCTATTTTTATAATTGATGAAGACTATCGTTCTGAAAATGTTTCTGGTCTTGGTATTAGAGCATT GGCTGAGGCTATAGAGTCTCAGGGTGTGAAGGTTATAGGTGTTACAGGTTATGGAGACATAAGCTCATTTGCTCAGCAGC AAAGTCGTGCTAGTGCATTCATATTATCTATTGATGATGAAGAATTTGATGTTGATTCTCCTGAAGATGTAGCGAGTATT ATAAAAAAATTGCGGGCCTTTATTAGTGAGTTAAGATTTCGTAATGCAGATATACCGATATATCTGTATGGAGAAACAAG GACATCTGAACATATTCCAAATGATATTTTGAGAGAATTACACGGTTTTATTCATATGTTTGAAGACACTCCTGAATTTG TTGCTAGGCATATCATAAGAGAAGCAAATAGTTACGTATCTTCTTTAGCTCCGCCTTTTTTCAGAGAGCTAGTTAAATAT GCTCAAGACGGATCATATTCTTGGCATTGTCCAGGACACTCTGGTGGAGTCGCATTTTTAAAAAGTCCTGTTGGACAAAT GTTTCATCAGTTTTTTGGTGAAAACATGCTTCGTGCAGATGTGTGTAATGCTGTTGATGAGTTAGGCCAGTTATTAGATC ATACAGGTCCTGTTGCTGAATCTGAGCTTAATGCTGCTAGGATTTTTCATGCTGATCGTTGTTATTTTGTTACTAATGGT ACTTCCACTTCTAATAAAATTGTATGGCATGCAAATGTTGCTAATGATGATATAGTGTTAGTGGATCGCAATTGTCATAA ATCTATTTTGCATGCTATAACAATGACTGGAGCAATTCCTGTTTTCTTGAGACCAACACGTAATAATTTTGGCATAATAG GTCCAATACCTTTGGATGAGTTTAATCCTGATAATATTAATAAGAAAATATTGTCAAATCCATTAGCAAAGAGATTAGCA AACAAAAAGCCAAGGATACTGACTCTTACCCAAAGTACATATGATGGTGTTATTTATAATGTTGAAATGATAAAAAAATA TCTTGATGGTTATGTGGATACTCTTCATTTTGATGAGGCTTGGTTGCCACACGCATCATTTCACGATTTTTATCAAGATA TGCATGCTATTGGAGAAAATAGACCTAGGGGCAATACTTCTATGATTTTTGCTACACATTCAACTCATAAATTGTTAGCA GGAATATCTCAAGCATCTCAAATAATTGTTCAAGAATCGGCTAATAGAAAATTTGACCATACGGCTTTTAATGAAGCTTA TCTGATGCATACCTCCACATCACCACAGTATGCGATTATAGCTTCTTGTGATGTTGCTGCTGCAATGATGGAGCCCCCAG GCGGGACAGCATTAGTAGAAGAAAGCATAAGAGAGGCAATGGATTTTAGACGTGCTATGCGTAAAGTAGAATCAGAATTT GGCAAAAATGATTGGTGGTTTAAAGTTTGGGGTCCTAACAGAATAGCTCAGGAAGGCATAGGTAATAGAGAAGATTGGAT GTTGTACTCTGATGATCAATGGCATGGTTTTGGGGATTTAGCATGTGGGTTCAACATGCTTGACCCTATAAAAACTACAA TTGTAACCCCTGGGCTAAGTATTTCTGGTAATTTTGGAGATTCTGGTATTCCGGCCTCTTTAGTATCTAAATATTTAGCA GAACATGGTGTTGTCGTAGAAAAAACTGGTCTTTATTCATTCTTTATTTTATTCACTATTGGTATTACTAAAGGAAGATG GAATAGTTTATTAACTGCTCTGCAGCAATTCAAAGATGATTATGATCGCAATCAACCAATGTGGCGTATATTGCCTGAAT TTTGTAAGTCTCAAAGAAAATACGAGCGATTAGGTATTAGAGATTTATGCAACCAAATTCATAATACCTATCGTGAGTAC GATATAGCTCATCTTACGACTGAAATGTATTTGAGTGAAATGACACCTGCAATGAAACCATCAGAAGCTTTTGCTAAAAT GGCTCATCGCGAAGTAGAGAAAGTTAAGATATCCGATCTTGAAGGACGAATTACAGGTGTGTTGCTAACACCATATCCAC CTGGAATACCATTGCTAATTCCAGGTGAACGTTTTAATAAAACAATAGTCAATTACTTGGAATTCGTCCGTGATTTTAAT GATGAATTTCCAGGATTCGAGAACTATATGCATGGCTTAACTATAGATATTGATGAAAATAGTAATAAAAATTATTATGT CGATTGTTTAGCTCAGTTATAA Protein sequence : MRFLFPIFIIDEDYRSENVSGLGIRALAEAIESQGVKVIGVTGYGDISSFAQQQSRASAFILSIDDEEFDVDSPEDVASI IKKLRAFISELRFRNADIPIYLYGETRTSEHIPNDILRELHGFIHMFEDTPEFVARHIIREANSYVSSLAPPFFRELVKY AQDGSYSWHCPGHSGGVAFLKSPVGQMFHQFFGENMLRADVCNAVDELGQLLDHTGPVAESELNAARIFHADRCYFVTNG TSTSNKIVWHANVANDDIVLVDRNCHKSILHAITMTGAIPVFLRPTRNNFGIIGPIPLDEFNPDNINKKILSNPLAKRLA NKKPRILTLTQSTYDGVIYNVEMIKKYLDGYVDTLHFDEAWLPHASFHDFYQDMHAIGENRPRGNTSMIFATHSTHKLLA GISQASQIIVQESANRKFDHTAFNEAYLMHTSTSPQYAIIASCDVAAAMMEPPGGTALVEESIREAMDFRRAMRKVESEF GKNDWWFKVWGPNRIAQEGIGNREDWMLYSDDQWHGFGDLACGFNMLDPIKTTIVTPGLSISGNFGDSGIPASLVSKYLA EHGVVVEKTGLYSFFILFTIGITKGRWNSLLTALQQFKDDYDRNQPMWRILPEFCKSQRKYERLGIRDLCNQIHNTYREY DIAHLTTEMYLSEMTPAMKPSEAFAKMAHREVEKVKISDLEGRITGVLLTPYPPGIPLLIPGERFNKTIVNYLEFVRDFN DEFPGFENYMHGLTIDIDENSNKNYYVDCLAQL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 2e-104 | 43 |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 7e-110 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CONE_0303 | YP_007460071.1 | arginine decarboxylase | VFG1670 | Protein | 1e-104 | 43 |
