Gene Information

Name : CONE_0477 (CONE_0477)
Accession : YP_007460217.1
Strain : Candidatus Kinetoplastibacterium oncopeltii TCC290E
Genome accession: NC_020299
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 284139 - 285665 bp
Length : 1527 bp
Strand : -
Note : Translation, ribosomal structure and biogenesis; SecretomeP prediction: 0.1.

DNA sequence :
ATGACTAATAAGACTGATACTGTAAATTCTGATCATGAAGAAAATAGACTTGTCCTAGAGAGACGCTTAAAACTTAATAA
ATACAGAGAAACAGGTTTTACATATCCCAATAATATTGTTCCAACTGAAAGCAATATAGATATTATTAATAACTATAAAG
ATCTTGATTCGGATGTTATTAACTTGAAGGATGTACAAGTTAAAATTTCTGGACGAATGATGTTAAAAAGAATTATGGGC
AAGGCAAGCTTTTCAACAATTCAAGATAGTACAGGTCGTATACAAATATATATATCTAAAAAAAATGTTGATGAAAAAAT
TTATAATGATTTCAAACAGTTTGATTTAGGTGATATTCTTTCAATAGAAGGAAGAGTCTTTAAAACAAACAAAGGAGAAT
TATCAATAAATGTTAAATCAATATCATTGATTTCTAAAGCTATAAGACCTTTACCTGAAAAATTTCATGGCATATCAGAT
CCAAATATAAAATATAGACAAAGATATATAGATCTGATAGTAACTGAAGAAACAAAAAAAACATTTGAATTGCGTAGCAA
GATAATAACTAATATTAGACAACACATGTCTAAAGAAGGTTTTATGGAGGTTGAAACACCAATGCTACATACAATTCCAG
GTGGAGCCGCTGCTAAGCCATTTACTACACACCATAACTCGCTCAATATGGATATGTATTTACGTATAGCCCCTGAATTG
TATTTGAAAAGACTTATAGTAGGTGGTTTTGATAAAGTATTTGAATTAAATCGTAATTTTAGAAATGAAGGAATAAGCCC
AAGACATAATCCTGAATTCACAATGATGGAGTTCTATGCTACATATACAGATTATAATTGGATGATGAATTTCACTGAAA
GATTAATATGTGAAATATCAATAGCTATAAACAATAAAAATTATTTGGATTATCAAGGCAAAACTATAAATTTATCAAAA
CCATTCGAACGCTTAAACATACGTAGTGCAATTTGCAAATATAACAAGAAATATAATATAGAACAACTTAATGATTATGC
TTTTTTACAAGAAGAACTAAATTTAATTGATAAAATGATACCAAAGGATTTTTTAAAATCTTCCAAATTAGGAGAATTAC
AATTATGTCTTTTTGAAAAAACAACAGAAGAAAAAATTTGGGATCCAACTTATATAATAGACTATCCGATTGAGACATCA
CCATTAGCAAGACAGTCAGATATTGATAAAAAGATAACGGAAAGATTTGAATTATTTATAGCGGGAAAGGAAATAGCAAA
TGGATTTTCTGAATTAAATGATCCAGAGGAACAAGCAAGAAGGCTACTAGAACAAGTTGAAAATAAAAATGAAAATTCAG
AAGAAAATCATCAAATGTTTTTTGATTCTGATTATATTACAGCCTTGGAATATGGCATGCCACCAACTGGTGGATGCGGC
ATAGGAATAGATAGATTAGTAATGCTAATAACAAACAAATCAAATATAAAAGACGTAATACTATTTCCTCATCTAAGAGA
AAAATAA

Protein sequence :
MTNKTDTVNSDHEENRLVLERRLKLNKYRETGFTYPNNIVPTESNIDIINNYKDLDSDVINLKDVQVKISGRMMLKRIMG
KASFSTIQDSTGRIQIYISKKNVDEKIYNDFKQFDLGDILSIEGRVFKTNKGELSINVKSISLISKAIRPLPEKFHGISD
PNIKYRQRYIDLIVTEETKKTFELRSKIITNIRQHMSKEGFMEVETPMLHTIPGGAAAKPFTTHHNSLNMDMYLRIAPEL
YLKRLIVGGFDKVFELNRNFRNEGISPRHNPEFTMMEFYATYTDYNWMMNFTERLICEISIAINNKNYLDYQGKTINLSK
PFERLNIRSAICKYNKKYNIEQLNDYAFLQEELNLIDKMIPKDFLKSSKLGELQLCLFEKTTEEKIWDPTYIIDYPIETS
PLARQSDIDKKITERFELFIAGKEIANGFSELNDPEEQARRLLEQVENKNENSEENHQMFFDSDYITALEYGMPPTGGCG
IGIDRLVMLITNKSNIKDVILFPHLREK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 1e-119 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CONE_0477 YP_007460217.1 lysyl-tRNA synthetase VFG1668 Protein 6e-120 49