Gene Information

Name : CDSE_0814 (CDSE_0814)
Accession : YP_007459503.1
Strain : Candidatus Kinetoplastibacterium desouzaii TCC079E
Genome accession: NC_020294
Putative virulence/resistance : Virulence
Product : multidrug efflux protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 588142 - 588471 bp
Length : 330 bp
Strand : +
Note : -

DNA sequence : 
ATGAAATTTATATATCTATCAATTGCAATCATTACTGAGCTATTAGCAACAATAGCATTAAAAAACTCAATTGGCTTTAC
TAAACTATGGCCTTCATTATTCACATGCACATTGTATGTCATTTCAACTTATTTCTTATCACTAACTCTACAAGATATAC
CTGTAGGAATAGCTTATGCAATATGGTGTGGAGTTGGTATAGTTCTAGTATCTATAATAGGATATTTCTACTTTGGACAA
GAATTAGATACAGCAGCTATAATAGGAATATCTATGATAGTCCTGGGAGTAATAGTCATGAATGTATTCTCGAAAGTCAG
CATGGACTAG

Protein sequence : 
MKFIYLSIAIITELLATIALKNSIGFTKLWPSLFTCTLYVISTYFLSLTLQDIPVGIAYAIWCGVGIVLVSIIGYFYFGQ
ELDTAAIIGISMIVLGVIVMNVFSKVSMD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42067.1 hypothetical protein Not tested PAI II 536 Protein 2e-11 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CDSE_0814 YP_007459503.1 multidrug efflux protein BAC0324 Protein 1e-14 54
CDSE_0814 YP_007459503.1 multidrug efflux protein NC_010410.6003348.p0 Protein 8e-15 53
CDSE_0814 YP_007459503.1 multidrug efflux protein BAC0002 Protein 8e-15 53
CDSE_0814 YP_007459503.1 multidrug efflux protein CP001138.1.gene1489. Protein 3e-12 52
CDSE_0814 YP_007459503.1 multidrug efflux protein BAC0150 Protein 1e-12 51
CDSE_0814 YP_007459503.1 multidrug efflux protein NC_002695.1.913273.p Protein 1e-12 51
CDSE_0814 YP_007459503.1 multidrug efflux protein BAC0322 Protein 5e-14 49
CDSE_0814 YP_007459503.1 multidrug efflux protein BAC0377 Protein 2e-15 48
CDSE_0814 YP_007459503.1 multidrug efflux protein BAC0325 Protein 9e-10 47
CDSE_0814 YP_007459503.1 multidrug efflux protein BAC0327 Protein 3e-08 45
CDSE_0814 YP_007459503.1 multidrug efflux protein CP004022.1.gene1549. Protein 2e-10 44
CDSE_0814 YP_007459503.1 multidrug efflux protein BAC0139 Protein 8e-11 44
CDSE_0814 YP_007459503.1 multidrug efflux protein BAC0192 Protein 7e-12 43
CDSE_0814 YP_007459503.1 multidrug efflux protein BAC0329 Protein 2e-10 42
CDSE_0814 YP_007459503.1 multidrug efflux protein BAC0321 Protein 3e-12 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CDSE_0814 YP_007459503.1 multidrug efflux protein VFG1586 Protein 8e-12 41