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Name : CDSE_0808 (CDSE_0808) Accession : YP_007459497.1 Strain : Candidatus Kinetoplastibacterium desouzaii TCC079E Genome accession: NC_020294 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 580758 - 582098 bp Length : 1341 bp Strand : - Note : Translation, ribosomal structure and biogenesis; SecretomeP prediction: 0.07. DNA sequence : ATGTTAGATATTGGTTTTTTACGTAGTGATCCACAAAAAGTAGCAAAAAGTTTACTTTCTCGTGGTTTTGATTTTAATGT AAATGAATTTGAAAGAGTTGAGTTCAATCGAAAAAAAATTCAACAAGAAACAGAGTCTTTACAAGCTAGACGTAATGTTT TAGCTAAGCAAATAGGTTTTTTGAAATCGCAAAATTTAGATGCAGATGAATTGATTTTGGAGTCTCAGTCTATTCCTGGT CAACTCAAAGATCTAGAAAAGGAACTCTCTAATTATCAAATTCTGATAAATGATATTTTATTGTCTTTGCCAAATTTACC TCATTCTACTGTTCCTTTGGGTCTTACTGATAAGGAAAATATAGAAATTAGGCGTTGGTACCCAGAGAATGTTTTTCCTG AAAATAAATTTACTAAAAAGGATTTTGATTATAAAGATCATATTTCTTTGGGGGAAAGATTGGGCCTAGATCTTACTACT GGTGTTAAGATGTCAGGTTCTAGATTTTCATTTATGAGAGGGAAGGTAGCTAGATTACATAGAGCTTTATCTCAATTTAT GTTGGATTTACATGTAACTCAACATGGTTACACTGAGTGTTATACTCCTTATATAGTAAATAGTTCTACTTTAATTGGAA CTGGACAATTGCCAAAATTTAAGGAAGATATGTTTTCTGTAAGAAAATATACTAATCATTGTAATCAAGATTCTTCCATT GTTGGAGATGATTATGAGGATCAGTATTTGATTTCTACATCAGAAATTACTTTAATTGGAAGTGTTTCAGATAGTATAGT GTCATTAGAGGAATTGCCAATTAAGTTAACAGCTCATACTCCATGTTTTAGATCTGAGGCTGGTAGTGGAGGTAGAGATA TTAAAGGTATTATAAGACAGCATCAGTTTGATAAAGTTGAATTGGTTCAAATAGTGGAACCTAAGCGTTCTTATGATGTT CTTGAGGATGTTTTATCTCACGCTGAAAGGGTTTTGCAATTATTGGAGTTGCCTTATAGAGTTGTTTTATTATCCTCTGG AGATATGGGTTTTTGTGCAGCGAAAACTTATGATTTAGAAGTTTGGTTGCCATCTCAACAGAATTGGCGAGAAATATCAT CAGTATCCAATTGTGAGTCTTTTCAAGCTAGAAGGATGAAGGCTCGTTTTCGTAATTCTAATGGTTCTGTAGAATATTTG CATACAATTAATGGTTCTGGTTTGGCTGTTGGAAGATCTCTAGTTGCTGTTTTGGAGAATTATCAGAATTCTGATGGAAG CATTACTGTGCCAGTTGTTTTGCGTGCCTATATGGGTGGTGAAAGTATACTAACACCATAG Protein sequence : MLDIGFLRSDPQKVAKSLLSRGFDFNVNEFERVEFNRKKIQQETESLQARRNVLAKQIGFLKSQNLDADELILESQSIPG QLKDLEKELSNYQILINDILLSLPNLPHSTVPLGLTDKENIEIRRWYPENVFPENKFTKKDFDYKDHISLGERLGLDLTT GVKMSGSRFSFMRGKVARLHRALSQFMLDLHVTQHGYTECYTPYIVNSSTLIGTGQLPKFKEDMFSVRKYTNHCNQDSSI VGDDYEDQYLISTSEITLIGSVSDSIVSLEELPIKLTAHTPCFRSEAGSGGRDIKGIIRQHQFDKVELVQIVEPKRSYDV LEDVLSHAERVLQLLELPYRVVLLSSGDMGFCAAKTYDLEVWLPSQQNWREISSVSNCESFQARRMKARFRNSNGSVEYL HTINGSGLAVGRSLVAVLENYQNSDGSITVPVVLRAYMGGESILTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-88 | 47 |
