Gene Information

Name : CDSE_0357 (CDSE_0357)
Accession : YP_007459123.1
Strain : Candidatus Kinetoplastibacterium desouzaii TCC079E
Genome accession: NC_020294
Putative virulence/resistance : Unknown
Product : integrase/recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 143832 - 144758 bp
Length : 927 bp
Strand : +
Note : DNA replication, recombination, and repair; SecretomeP prediction: 0.23.

DNA sequence : 
ATGTGTTCACGTGATGATAGAGATATAAGAAAATTTTCTTCTGAAATTACAAATAGATTTTTGAATTCTATTTGGTTGGA
AGAAGGTTTATCTAACAATACTATATCTGCATATAAAAATGATCTTAAATCATTTTCAACTTGGGTTTTAAATAATAAAA
ATAAAAGTATTATTGATAATATTAATGAAGATGATATTCAGAAATGGTTTATTGAACAACATTCGTCTATTAAAGCATCA
ACTTCTAATCGTCGGTTGGCAGTTTTAAAACGCTTTTATGTTTGGGCAGCTCGCGAAAAACTTGTATTGTATAATCCTTG
TATTTCTATAAGAACAGCTAAGTATTTTAGGCAAATTCCTATTACTCTATCAGAAGATCAAGTAGAAAGACTTATTATGG
CTCCAGATGTCAACGATATTAGGGGATTGAGGGATCGTGCAATGTTAGAAGTTCTATATTCTACTGGGTTACGTGTTTCA
GAGTTGGTTGGGTTAAAAATAAGAGATCTTAATCTAAATGATGGAGTAGTGCATGTTGTTCTTGGAAAGGGAGCTAAGGA
TAGATTAGTGCCTTTAGGGGAAGAATGTATGTTTTGGGTTAATAGATACTTGCATGATTCACGTAGTTATATTTTGAAAA
ATAAAAAAAGTGATTTTTTATTTATTACAAATAGATCTAATTCTATGACTCGTCAAGCTTTTTGGCTTTTGATTAAAAAA
TATGCTTTTATAGCTAATATTTGTACCCCATTATCTCCTCATGCTATGCGTCACGCTTTTGCTACTCATTTATTAAATAA
TGGAGCTGATCTTAGAGTAGTGCAATTATTGCTTGGTCATTCTGATATTTCTACTACGCAAATTTATACTCATGTAGCAA
ATGAAAGGTTGAAAAAATTACATTTAAAACATCACCCTCGTGGTTGA

Protein sequence : 
MCSRDDRDIRKFSSEITNRFLNSIWLEEGLSNNTISAYKNDLKSFSTWVLNNKNKSIIDNINEDDIQKWFIEQHSSIKAS
TSNRRLAVLKRFYVWAAREKLVLYNPCISIRTAKYFRQIPITLSEDQVERLIMAPDVNDIRGLRDRAMLEVLYSTGLRVS
ELVGLKIRDLNLNDGVVHVVLGKGAKDRLVPLGEECMFWVNRYLHDSRSYILKNKKSDFLFITNRSNSMTRQAFWLLIKK
YAFIANICTPLSPHAMRHAFATHLLNNGADLRVVQLLLGHSDISTTQIYTHVANERLKKLHLKHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-53 54
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-53 54