Gene Information

Name : Cspa_c07050 (Cspa_c07050)
Accession : YP_007453744.1
Strain : Clostridium saccharoperbutylacetonicum N1-4(HMT)
Genome accession: NC_020291
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 773831 - 774538 bp
Length : 708 bp
Strand : +
Note : -

DNA sequence :

ATGAAAGCGCCTATTGTTACAGTCAAAGATATTGTAAAAGAATATGCTATGGGAGAAGTAACTGTAAAAGCTTCTAATAA
CATGAACTTTGAAATTTTTGAGGGAGAGTTTGTTGTTGTATTAGGACCAAGTGGGTCCGGAAAAAGTACAGTATTAAATA
TGATTGGTGGAATGGATAGGCCAACTTCTGGTGAAGTAATTATTGACGGCGAAAATATAACAAAGTACTCAGATAACCAA
CTAACTACTTACAGGAGAAAGAAAATAGGTTTTGTGTTTCAATTCTATAATTTAATGCCAAACTTAACAGCTATAGAAAA
TGTTGAATTAGTAATTCCTCTCAGTGATAATCCATTAAAAGCTGAAGAAATTATGAAAGACGTAGGTTTAAGCGAAAGAG
CATCAAATTTTCCAGCGCAGCTTTCAGGGGGAGAACAACAGAGGGTGGCAATTGCAAGAGCTCTGGTTAAAAATCCTTTG
TTGCTTTTATGTGATGAGCCAACAGGTGCATTAGATTATAAGACAGGAAAATTAATTTTAAAGTTGCTTCATGATATTAA
TAAGAATATGAATAAGACAATAATAGTTATCACACACAACGCTGCCATAGCAGCAATGGCCGACAGGATTATTACTGTAA
AAAGCGGAGCAGTAGAAGCCATAAAGGTTAATGAAAATCCTGAGCCACCAGAAAGGATTGAGTGGTAA

Protein sequence :

MKAPIVTVKDIVKEYAMGEVTVKASNNMNFEIFEGEFVVVLGPSGSGKSTVLNMIGGMDRPTSGEVIIDGENITKYSDNQ
LTTYRRKKIGFVFQFYNLMPNLTAIENVELVIPLSDNPLKAEEIMKDVGLSERASNFPAQLSGGEQQRVAIARALVKNPL
LLLCDEPTGALDYKTGKLILKLLHDINKNMNKTIIVITHNAAIAAMADRIITVKSGAVEAIKVNENPEPPERIEW

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
Cp1002_1464	YP_005681730.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	5e-35	43
CpC231_1466	YP_005683828.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	2e-35	42
cpfrc_01473	YP_003783873.1	hypothetical protein	Not tested	PiCp 5	Protein	2e-35	42
CpI19_1473	YP_005685914.1	ABC transporter ATP-binding protein	Not tested	PiCp 5	Protein	2e-35	42

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Cspa_c07050	YP_007453744.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_012469.1.7685735.	Protein	9e-61	53
Cspa_c07050	YP_007453744.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_012469.1.7686878.	Protein	1e-42	47
Cspa_c07050	YP_007453744.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene798.p	Protein	5e-43	46
Cspa_c07050	YP_007453744.1	ABC-type antimicrobial peptide transport system, ATPase component	CP001581.1.gene598.p	Protein	1e-39	44
Cspa_c07050	YP_007453744.1	ABC-type antimicrobial peptide transport system, ATPase component	NC_008702.1.4606598.	Protein	2e-35	42