Gene Information

Name : Cspa_c53480 (Cspa_c53480)
Accession : YP_007458347.1
Strain : Clostridium saccharoperbutylacetonicum N1-4(HMT)
Genome accession: NC_020291
Putative virulence/resistance : Virulence
Product : sugar transferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5926411 - 5927016 bp
Length : 606 bp
Strand : -
Note : -

DNA sequence : 
ATGAATAAATTTAACAAAATAGTTAAAAGAATATTTGATTTAATATGCTCTACTTTAGGACTTATTGTGTTAAGTCCAGT
TTTATTAGTAATTGCAATAAGAATAAAAACAGGTTCAGATGGACCAGTATTTTTCAAACAAATACGAGTAGGTGAAAGAA
GTAAGGAATTTGAAATTCTTAAATTTAGGACTATGGTTGTTGATGCTGAAAAATTAGGAAGACAAATAACTGTTGGAAAT
GATAGTAGAATTACTAAAATAGGCGCATTTTTAAGAAAATATAAACTTGATGAATTACCACAGCTAATAAATGTATTTAA
AGGTGATATGAGCCTGGTTGGGCCAAGGCCAGAAGTACCTAGATATGTTAAACTATATAATGAAGAACAAATACGAGTCT
TAGAAGTGAAACCTGGTATAACAGATTTAGCGTCTATTAGATATAGAGATGAGAATGATTTGCTTGGAGAAGTAGAGAAT
CCAGATGAATTTTATATAAATACAATTATGCCAGATAAACTAGCCTTGAATTTAGAATACATAAATAAAAACAACATATT
TTTAGATATTTATATAATACTTAAAACAATAATAAAATGCATTTAG

Protein sequence : 
MNKFNKIVKRIFDLICSTLGLIVLSPVLLVIAIRIKTGSDGPVFFKQIRVGERSKEFEILKFRTMVVDAEKLGRQITVGN
DSRITKIGAFLRKYKLDELPQLINVFKGDMSLVGPRPEVPRYVKLYNEEQIRVLEVKPGITDLASIRYRDENDLLGEVEN
PDEFYINTIMPDKLALNLEYINKNNIFLDIYIILKTIIKCI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 6e-22 46
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 2e-22 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Cspa_c53480 YP_007458347.1 sugar transferase VFG0032 Protein 2e-39 55
Cspa_c53480 YP_007458347.1 sugar transferase VFG1309 Protein 6e-24 44
Cspa_c53480 YP_007458347.1 sugar transferase VFG1369 Protein 5e-19 42